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gene.php
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gene.php
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<?php
require('./nav.inc.php');
$id = $_GET['id'];
$sql = "SELECT * FROM genes WHERE gene_id = {$id}";
$result = mysqli_query($con, $sql);
$data = mysqli_fetch_assoc($result);
$taxId = $data['tax_id'];
$orgName = $data['org_name'];
$symbol = $data['symbol'];
$aliases = $data['aliases'];
$desc = $data['description'];
$designations = $data['other_designations'];
$mapLocation = $data['map_location'];
$chromosome = $data['chromosome'];
$nucleotideAccession = $data['genomic_nucleotide_accession.version'];
$startPos = $data['start_position_on_the_genomic_accession'];
$endPos = $data['end_position_on_the_genomic_accession'];
$orientation = $data['orientation'];
$exonCount = $data['exon_count'];
$designations = str_replace("|","<br>",$designations);
$aliases = str_replace(",","<br>",$aliases);
if($aliases == '') {
$aliases = "-";
}
?>
<link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/bootstrap@4.6.0/dist/css/bootstrap.min.css" integrity="sha384-B0vP5xmATw1+K9KRQjQERJvTumQW0nPEzvF6L/Z6nronJ3oUOFUFpCjEUQouq2+l" crossorigin="anonymous">
<div class="landing-gene" data-aos="fade-right" data-aos-duration="1200">
<div class="container">
<h1 class="pb-4"><?php echo $desc ?></h1>
<ul class="list-group">
<li class="list-group-item">
<div class="row">
<div class="col-6">
Gene Id
</div>
<div class="col-6">
<?php echo $id ?>
<a
target="_blank"
href="https://www.ncbi.nlm.nih.gov/gene/<?php echo $id ?>"
class="btn btn-sm btn-secondary"
>
NCBI Gene Page
</a>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Symbol
</div>
<div class="col-6">
<?php echo $symbol ?>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
TaxId
</div>
<div class="col-6">
<?php echo $taxId ?>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Organism Name
</div>
<div class="col-6">
<?php echo $orgName ?>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Aliases
</div>
<div class="col-6">
<?php echo $aliases ?>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Other Designations
</div>
<div class="col-6">
<?php echo $designations ?>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Map Location
</div>
<div class="col-6">
<?php echo $mapLocation ?>
<a
target="_blank"
href="https://www.ncbi.nlm.nih.gov/genome/gdv/browser/gene/?id=<?php echo $id ?>"
class="btn btn-sm btn-secondary"
>
Genome Data Viewer
</a>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Chromosome
</div>
<div class="col-6">
<?php echo $chromosome ?>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Genomic Nucleotide Accession
</div>
<div class="col-6">
<?php echo $nucleotideAccession ?>
<a
target="_blank"
href="https://www.ncbi.nlm.nih.gov/nuccore/<?php echo $nucleotideAccession ?>"
class="btn btn-sm btn-secondary"
>
NCBI Nucleotide Page
</a>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Start Position in Nucleotide Accession
</div>
<div class="col-6">
<?php echo $startPos ?>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
End Position in Nucleotide Accession
</div>
<div class="col-6">
<?php echo $endPos ?>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Orientation
</div>
<div class="col-6">
<?php echo $orientation ?>
</div>
</div>
</li>
<li class="list-group-item">
<div class="row">
<div class="col-6">
Exon Count
</div>
<div class="col-6">
<?php echo $exonCount ?>
</div>
</div>
</li>
</ul>
<div class="container p-2 text-center">
<button class="btn btn-danger" onclick="history.back(-1)">Go Back</button>
</div>
</div>
</div>
<?php
require('./footer.inc.php');
?>