_config.yml

# Welcome to Jekyll!
#
# This config file is meant for settings that affect your entire site, values
# which you are expected to set up once and rarely need to edit after that.
# For technical reasons, this file is *NOT* reloaded automatically when you use
# `jekyll serve`. If you change this file, please restart the server process.

# Theme Settings
#
# Review documentation to determine if you should use `theme` or `remote_theme`
# https://mmistakes.github.io/minimal-mistakes/docs/quick-start-guide/#installing-the-theme

remote_theme: "mmistakes/minimal-mistakes@4.22.0"
minimal_mistakes_skin: "dark" # "air", "aqua", "contrast", "dark", "default", "dirt", "neon", "mint", "plum", "sunrise"

# Site Settings
locale: "en-US"
title: "Site Title"
title_separator: "-"
subtitle: "subtitle" # site tagline that appears below site title in masthead
name: "FirstName LastName"
description: "Description"
github: [metadata]
url: "https://cristal-sigma.github.io"
baseurl: "" # the subpath of your site, e.g. "/blog"
repository: "CRIStAL-Sigma/cristal-sigma.github.io"
teaser: # path of fallback teaser image, e.g. "/assets/images/500x300.png"
logo: # path of logo image to display in the masthead, e.g. "/assets/images/88x88.png"
masthead_title: # overrides the website title displayed in the masthead, use " " for no title
# breadcrumbs            : false # true, false (default)
words_per_minute: 200
date_format: "%Y-%m-%d"
comments:
  provider: # false (default), "disqus", "discourse", "facebook", "staticman", "staticman_v2", "utterances", "custom"
  disqus:
    shortname: # https://help.disqus.com/customer/portal/articles/466208-what-s-a-shortname-
  discourse:
    server: # https://meta.discourse.org/t/embedding-discourse-comments-via-javascript/31963 , e.g.: meta.discourse.org
  facebook:
    # https://developers.facebook.com/docs/plugins/comments
    appid:
    num_posts: # 5 (default)
    colorscheme: # "light" (default), "dark"
  utterances:
    theme: # "github-light" (default), "github-dark"
    issue_term: # "pathname" (default)
  staticman:
    branch: # "master"
    endpoint: # "https://{your Staticman v3 API}/v3/entry/github/"
reCaptcha:
  siteKey:
  secret:
atom_feed:
  path: # blank (default) uses feed.xml
  hide: # true, false (default)
search: # true, false (default)
search_full_content: # true, false (default)
search_provider: # lunr (default), algolia, google
algolia:
  application_id: # YOUR_APPLICATION_ID
  index_name: # YOUR_INDEX_NAME
  search_only_api_key: # YOUR_SEARCH_ONLY_API_KEY
  powered_by: # true (default), false
google:
  search_engine_id: # YOUR_SEARCH_ENGINE_ID
  instant_search: # false (default), true
# SEO Related
google_site_verification:
bing_site_verification:
yandex_site_verification:
naver_site_verification:

# Social Sharing
twitter:
  username:
facebook:
  username:
  app_id:
  publisher:
og_image: # Open Graph/Twitter default site image
# For specifying social profiles
# - https://developers.google.com/structured-data/customize/social-profiles
social:
  type: # Person or Organization (defaults to Person)
  name: # If the user or organization name differs from the site's name
  links: # An array of links to social media profiles

# Analytics
analytics:
  provider: false # false (default), "google", "google-universal", "google-gtag", "custom"
  google:
    tracking_id:
    anonymize_ip: # true, false (default)

# Site Author
# See also how profile is displayed in
# _includes/author-profile.html
# _includes/author-profile-custom-links.html
author:
  name: "FirstName LastName"
  avatar: "/assets/images/bio-photo.jpg"
  bio: "My short bio<br>Second line<br>"
  location: "Lille, France"
  email: "my.name@email.com"
  github: "CRIStAL-Sigma"
  webpage: "https://cristal-sigma.github.io"
  # Academic profiles
  # To make logo+link appear in author_profile on the left side of the page
  # - fill the corresponding field
  # - uncomment the correspond _includes/author-profile-custom-links.html
  academic_profiles:
    academia:
    acclaim:
    acm:
    acmdl:
    ads:
    africarxiv:
    arxiv: "https://arxiv.org/a/<orcid-id | arxiv-id>"
    biorxiv:
    ceur:
    ciencia-vitae:
    closed-access:
    conversation:
    coursera:
    crossref:
    cv:
    datacite:
    dataverse:
    dblp:
    depsy:
    doi:
    dryad:
    elsevier:
    figshare:
    google-scholar: "https://scholar.google.com/citations?user=<user-id>=en"
    hal:
    hypothesis:
    ideas-repec:
    ieee:
    impactstory:
    inaturalist:
    inpn:
    inspire:
    isidore:
    jstor:
    lattes:
    mathoverflow:
    mendeley:
    moodle:
    nakala:
    open-access:
    open-data:
    open-materials:
    obp:
    openedition:
    orcid: "https://orcid.org/<orcid-id>"
    osf:
    overleaf:
    philpapers:
    piazza:
    preregistered:
    protocols:
    psyarxiv:
    publons:
    pubmed:
    pubpeer:
    researcherid:
    researchgate:
    ror:
    sci-hub:
    scirate:
    scopus:
    semantic-scholar:
    springer:
    ssrn:
    stackoverflow:
    zenodo:
    zotero:
  links:
    # See also how links are displayed in _includes/author-profile.html
    # uncomment url to make link appear
    - label: "Email" # used above
      icon: "fas fa-fw fa-envelope"
      # url: "mailto:your.name@email.com"
    - label: "Website"
      icon: "fas fa-fw fa-link"
      # url: "https://<webpage-link>"
    - label: "Twitter"
      icon: "fab fa-fw fa-twitter-square"
      # url: "https://twitter.com/"
    - label: "Facebook"
      icon: "fab fa-fw fa-facebook-square"
      # url: "https://facebook.com/"
    - label: "GitHub"
      icon: "fab fa-fw fa-github"
      # url: "https://github.com/CRIStAL-Sigma"
    - label: "Instagram"
      icon: "fab fa-fw fa-instagram"
      # url: "https://instagram.com/"

# Site Footer
# - see how links are displayed in _includes/footer.html
# - add custom links in _includes/footer/custom.html
footer:
  links: # uncomment url to make link appear
    - label: "Twitter"
      icon: "fab fa-fw fa-twitter-square"
      # url:
    - label: "Facebook"
      icon: "fab fa-fw fa-facebook-square"
      # url:
    - label: "GitHub"
      icon: "fab fa-fw fa-github"
      url: "https://github.com/CRIStAL-Sigma"
    - label: "GitLab"
      icon: "fab fa-fw fa-gitlab"
      # url:
    - label: "Bitbucket"
      icon: "fab fa-fw fa-bitbucket"
      # url:
    - label: "Instagram"
      icon: "fab fa-fw fa-instagram"
      # url:

# Reading Files
include:
  - .htaccess
  - _pages
exclude:
  - "*.sublime-project"
  - "*.sublime-workspace"
  - vendor
  - .asset-cache
  - .bundle
  - .jekyll-assets-cache
  - .sass-cache
  - assets/js/plugins
  - assets/js/_main.js
  - assets/js/vendor
  - Capfile
  - CHANGELOG
  - config
  - Gemfile
  - Gruntfile.js
  - gulpfile.js
  - LICENSE
  - log
  - node_modules
  - package.json
  - package-lock.json
  - Rakefile
  - README
  - tmp
  - /docs # ignore Minimal Mistakes /docs
  - /test # ignore Minimal Mistakes /test
keep_files:
  - .git
  - .svn
encoding: "utf-8"
markdown_ext: "markdown,mkdown,mkdn,mkd,md"

# Conversion
markdown: kramdown
highlighter: rouge
lsi: false
excerpt_separator: "\n\n"
incremental: false

# Markdown Processing
kramdown:
  input: GFM
  hard_wrap: false
  auto_ids: true
  footnote_nr: 1
  entity_output: as_char
  toc_levels: 1..6
  smart_quotes: lsquo,rsquo,ldquo,rdquo
  enable_coderay: false

# Sass/SCSS
sass:
  sass_dir: _sass
  style: compressed # https://sass-lang.com/documentation/file.SASS_REFERENCE.html#output_style

# Outputting
permalink: /:categories/:title/
paginate: 5 # amount of posts to show
paginate_path: /page:num/
timezone: Europe/Paris # https://en.wikipedia.org/wiki/List_of_tz_database_time_zones

# Plugins (previously gems:)
plugins:
  - jekyll-paginate
  - jekyll-sitemap
  - jekyll-gist
  - jekyll-feed
  - jekyll-include-cache
  # Additional plugins
  - jekyll-scholar # see scholar:

# https://github.com/inukshuk/jekyll-scholar
scholar:
  style: ./_bibliography/apa.csl # apa ./_bibliography/<any-style>.csl> from https://github.com/citation-style-language/styles
  locale: en

  sort_by: year
  order: descending
  bibliography_list_attributes:
    reversed: "reversed"

  source: _bibliography # where .bib files are saved
  bibliography: example.bib # .bib file
  # Custom bibliography display in _layouts/bibliography.html
  bibliography_template: bibliography

  query: "@*"

# mimic GitHub Pages with --safe
whitelist:
  - jekyll-paginate
  - jekyll-sitemap
  - jekyll-gist
  - jekyll-feed
  - jekyll-include-cache

# Archives
#  Type
#  - GitHub Pages compatible archive pages built with Liquid ~> type: liquid (default)
#  - Jekyll Archives plugin archive pages ~> type: jekyll-archives
#  Path (examples)
#  - Archive page should exist at path when using Liquid method or you can
#    expect broken links (especially with breadcrumbs enabled)
#  - <base_path>/tags/my-awesome-tag/index.html ~> path: /tags/
#  - <base_path>/categories/my-awesome-category/index.html ~> path: /categories/
#  - <base_path>/my-awesome-category/index.html ~> path: /
category_archive:
  type: liquid
  path: /categories/
tag_archive:
  type: liquid
  path: /tags/
# https://github.com/jekyll/jekyll-archives
# jekyll-archives:
#   enabled:
#     - categories
#     - tags
#   layouts:
#     category: archive-taxonomy
#     tag: archive-taxonomy
#   permalinks:
#     category: /categories/:name/
#     tag: /tags/:name/

# HTML Compression
# - https://jch.penibelst.de/
compress_html:
  clippings: all
  ignore:
    envs: development

# Defaults
defaults:
  # _posts
  - scope:
      path: ""
      type: posts
    values:
      author_profile: true
      comments: # true
      layout: single
      read_time: true
      related: true
      share: true
      show_date: true
  # _pages
  - scope:
      path: ""
      type: pages
    values:
      author_profile: true
      layout: single