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Issues list

Generating a Clipped/Filtered Graph from a {graph_name}.full.gbz file
#1540 opened Nov 23, 2024 by EEEdyeah
using --defaultCores 2 breaks clip_vg
#1539 opened Nov 22, 2024 by alpapan
When comparing Cactus, the input evolutionary tree (phylogenetic tree) is not very accurate
#1537 opened Nov 22, 2024 by helloworldABCD1234
5
High UID/GID in Cactus Docker Image Causes Failure with Rootless Docker
#1531 opened Nov 18, 2024 by Wabanero
1
Error in filter-paf-deletion with the command 'vg convert' in minigraph-cactus pipeline
#1528 opened Nov 17, 2024 by GooLey1025
3
Crash after weeks with errors about fastas with bad headers and empty fasta sequences
#1525 opened Nov 15, 2024 by mtvector
9
cactus vs multiz
#1523 opened Nov 14, 2024 by evgenyleushkin
1
hal to multiple sequence fasta alignment
#1521 opened Nov 11, 2024 by dylandebaun
1
Question about gap deletions, gap ins and gap dups
#1520 opened Nov 8, 2024 by lsoler-clavel
1
cactus-hal2chains keep the best match
#1519 opened Nov 6, 2024 by lyt57
2
Minimal configuration for 100 genomes mammal size
#1512 opened Oct 31, 2024 by fgualdr
4
Question about pangenome building in species with high level of large translocations
#1508 opened Oct 24, 2024 by GabrieleRigano99
2
slurm erro
#1504 opened Oct 16, 2024 by jwli-code
1
Identifying orthologous sites
#1496 opened Oct 9, 2024 by Marh32
4
Job used more disk than requested.
#1494 opened Oct 2, 2024 by jeramiahsmith
4
Duplicated variants in a pangenome VCF
#1493 opened Oct 2, 2024 by Han-Cao
10
v2.8.1: diploid input, haploid output
#1492 opened Oct 1, 2024 by dmjask
3
VCF output for different "--filter N" option
#1490 opened Sep 26, 2024 by shin0727
1
Can I use cactus to compare multiple Poaceae plant genomes?
#1487 opened Sep 25, 2024 by liuyt57
2
How to obtain the alignment of two hap for an individual
#1480 opened Sep 11, 2024 by xuxingyubio
3
Assertion `i == paf->query_end' failed
#1476 opened Sep 8, 2024 by macmanes
2
MAF sequence names
#1472 opened Aug 30, 2024 by austinchipps
2
Failed job cactus_consolidate
#1471 opened Aug 27, 2024 by jallen73
1
Long reads mapping - tutorial
#1470 opened Aug 24, 2024 by leone93
1
PBS PRO - workflow
#1468 opened Aug 22, 2024 by fgualdr
1
ProTip! Updated in the last three days: updated:>2024-11-20.