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.gitignore
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# Windows image file caches
Thumbs.db
ehthumbs.db
# Folder config file
Desktop.ini
# Recycle Bin used on file shares
$RECYCLE.BIN/
# Windows Installer files
*.cab
*.msi
*.msm
*.msp
*.xls
*.xlsx
*.docx
*.doc
*.tif
*.psd
*.tiff
# Windows shortcuts
*.lnk
# =========================
# Operating System Files
# =========================
# OSX
# =========================
.DS_Store
.AppleDouble
.LSOverride
# Thumbnails
._*
# Files that might appear in the root of a volume
.DocumentRevisions-V100
.fseventsd
.Spotlight-V100
.TemporaryItems
.Trashes
.VolumeIcon.icns
/docs/
docs/*
*/data/*
results/*
/Epithelia3DOld/*
/Gastrulation/*/edge4d_*
Gastrulation/*/data/*
Gastrulation/*/docs/*
Gastrulation/*/results/*
*/Energy measurements/*
/CABD/
/Salivary Glands/Confocal stacks/Confocal images/
/Salivary Glands/Confocal stacks/Segmented images/
/Salivary Glands/Confocal stacks/Segmented images data/
/Salivary Glands/Tolerance model/Data/
/Salivary Glands/Tolerance model/Images/
/Salivary Glands/Tolerance model/Seeds/
/Salivary Glands/Tolerance model/*.docx
/Salivary Glands/Voronoi model/Images/
/Salivary Glands/Voronoi model/Seeds/
/Salivary Glands/*.xls
/Salivary Glands/*.xlsx
/Salivary Glands/*/data/*
/culture epithelia/
/Egg chamber/Confocal Images/
/Egg chamber/Segmented images/
/Egg chamber/Segmented images data/
/Egg chamber/resultsVoronoiEllipsoid/
/Egg chamber/results/
/Egg chamber/classifier.model
/Gastrulation/rawImages & paper/
/Gastrulation/selectedMotif/
/Gastrulation/*.mat
/Gastrulation/*.xlsx
/Wing disc/
/Embryo_Sol/
/ZEBRA FISH/
/*.xls
*/docs/*
/Egg chamber/Code/results/
/CellFit/exeProgram/
/CellFit/Meshes/
/CellFit/WatershedImages/
/CellFit/data/
# Directories potentially created on remote AFP share
.AppleDB
.AppleDesktop
Network Trash Folder
Temporary Items
.apdisk
*.asv
*.png
*.bmp
*.fig
*.pdf
*.mat
*.stl
*.jpg
*.csv
*.txt
InSilicoModels/EllipsoidModel/frustaEllipsoidModel/logFile
InSilicoModels/EllipsoidModel/voronoiEllipsoidModel/logFile
InSilicoModels/paperCode/SpheroidModel/logFile
*.exe
*.obj
*.zip
*.eps
*.dat
*.ply
*.mgxm
*.py
*.m~
*.rtf
*.nd2
*.tmp
*.lsm
*.gif
*.avi
*.mp4
*.idraw
*.svg
*.Rmd
*.rda
3D_laws/stats_polygonDistributions/excelData/.Rhistory