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check(): Error: "Running the tests in ‘tests/testthat.R’ failed" #82

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dschlaep opened this issue Mar 8, 2017 · 0 comments
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check(): Error: "Running the tests in ‘tests/testthat.R’ failed" #82

dschlaep opened this issue Mar 8, 2017 · 0 comments
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Clean code

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@dschlaep
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dschlaep commented Mar 8, 2017

“Running the tests in ‘tests/testthat.R’ failed”.

However, devtools::test() successfully completes all tests.

test()
Loading rSFSW2
Package 'rSFSW2' v2.0.0-9020 (2017-03-08) attached/loaded.
Testing rSFSW2
dbOutput: action: check: .............
dbWork: runIDs organization: ......
Delta-hybrid (mod3) downscaling: add_delta_to_PPT: ..............
Delta-hybrid (mod3) downscaling: applyPPTdelta_simple and applyPPTdelta_detailed: .........................
Delta-hybrid (mod3) downscaling: fix_PPTdata_length: ...........
GISSM: germination_wait_times: .............
GISSM: get_KilledBySoilLayers: ...................
GISSM: setFALSE_SeedlingSurvival_1stSeason: .........
Indices: .........................................................................................................
Input/Output of rSFSW2 datafiles: ...........
Match for appending data: ....
Pedotransfer functions: SWP <-> VWC: ...................................................................................................................................................

DONE ===========================================================================

Adding Sys.setenv("R_TESTS" = "") to testthat.R as recommended in r-lib/testthat#86 and r-lib/testthat#144 doesn't fix this.

* checking tests ...
ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:

# Remove following line when that issue in R is fixed.
Sys.setenv("R_TESTS" = "")

library("testthat")
library("rSFSW2")

test_check("rSFSW2")
@dschlaep dschlaep added this to the rSWSF milestone Mar 8, 2017
dschlaep pushed a commit that referenced this issue Mar 8, 2017
Updated and fixed documentation
5e46cc3 
- 2 remaining notes (see #80 and #81)
- 1 remaining warning (see #79)
- 1 error: “Running the tests in ‘tests/testthat.R’ failed”. However,
devtools::test() successfully completes all tests. (see #82)

Other fixes:
- added ‘Sys.setenv("R_TESTS" = “”)’ to testthat.R
- function ‘GriddedDailyWeatherFromNCEPCFSR_Global’ was missing
argument ‘verbose’
- cleanup in function ‘generate_RNG_streams’ moved to call to on.exit()
@dschlaep dschlaep modified the milestones: rSWSF, pass_R_CMD_check Jun 26, 2017
dschlaep added a commit that referenced this issue May 9, 2018
@dschlaep
Reflect updates to testthat v2.0.0
63977bc 
- close #82: we can now remove `Sys.setenv("R_TESTS" = "")` from file `tests/testthat.R`: this issue is now fixed
- change reporter from "Summary" to "List"
@dschlaep dschlaep closed this as completed May 9, 2018
@CaitlinA CaitlinA mentioned this issue Feb 19, 2019
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