From 8ee563649a35b17c909961a47e74c58efe71eacc Mon Sep 17 00:00:00 2001
From: Jian Sheng Boey <95262076+JSBoey@users.noreply.github.com>
Date: Wed, 4 Sep 2024 13:19:43 +1200
Subject: [PATCH] Change checkM extension

---
 docs/day2/ex9_refining_bins.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/day2/ex9_refining_bins.md b/docs/day2/ex9_refining_bins.md
index 0032fa1..2ace91f 100644
--- a/docs/day2/ex9_refining_bins.md
+++ b/docs/day2/ex9_refining_bins.md
@@ -440,7 +440,7 @@ Moment of truth! How did your decisions impact the genome metrics of the refined
     # Run CheckM
     checkm lineage_wf -t $SLURM_CPUS_PER_TASK \
                       --pplacer_threads $SLURM_CPUS_PER_TASK \
-                      -x fa --tab_table -f refined_bins.checkm.txt \
+                      -x fna --tab_table -f refined_bins.checkm.txt \
                       refined_bins/ refined_bins.checkm_out/
     ```