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itr.html
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---
layout: idr
title: ITR
redirect_from:
- itr/
---
<script>
const LOGOS = {{ site.data.logos | jsonify }};
const TAGS = {{ site.data.tags | jsonify }};
const TOOLS = {{ site.data.tools | jsonify }};
const BIIS_LOGO_URL = "{{"/img/itr/logo_biis.png" | prepend: site.baseurl }}?{{ site.time | date: '%s%N' }}";
</script>
<header class="marketing-hero">
<div class="row homepage text-center">
<div class="medium-12 columns">
<h1 class="hero-main-header">ITR</h1>
<p class="hero-subheader small-10 medium-10 large-10 small-offset-1 medium-offset-1 large-offset-1">
Image Tools Resource (ITR) is an index of suggested open-source
analysis software for bioimaging. Though a work-in-progress,
the aim is to publish tools that have links to accessible
datasets, benchmarking resources, and public workflows to aid
in training and reproducibility.
</p>
</div>
</div>
</header>
<hr class="invisible">
<div class="row">
<div class="small-12 small-centered medium-12 medium-centered columns">
<div class="row horizontal">
<div>
<p>Below you will find community-driven
<span class="bold">projects</span>, their entry in the Bio Image Information Index
(<a href="https://biii.eu">https://biii.eu</a>),
<span class="bold">domains</span> in which the software is applicable,
<span class="bold">tags</span> sampling the tasks that the software is useful for, and a list of
<span class="bold">datasets</span>, both in the IDR and elsewhere.</p>
<p>If you would like to submit tools to the ITR, please email us at
<a href="mailto:itr@openmicroscopy.org">itr@openmicroscopy.org</a>.</p>
</div>
</div>
</div>
</div>
<div class="row itrBody">
<div class="small-12 columns">
<table id="tools" class="display unstriped" cellspacing="0" width="100%">
</table>
</div>
</div>
<div id="projectModal" class="project-modal large reveal" data-reveal></div>
<script src="{{ "/js/itr.js" | prepend: site.baseurl }}?{{ site.time | date: '%s%N' }}"></script>