Processing FLiES Harvard Forest.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "import numpy as np\n",
    "import pandas as pd\n",
    "from FLiES_sensitivity import process_FLiES_table"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [
    {
     "data": {
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       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>Unnamed: 0</th>\n",
       "      <th>tower</th>\n",
       "      <th>lat</th>\n",
       "      <th>lon</th>\n",
       "      <th>orbit</th>\n",
       "      <th>scene</th>\n",
       "      <th>tile</th>\n",
       "      <th>time_UTC</th>\n",
       "      <th>date_UTC</th>\n",
       "      <th>time_solar</th>\n",
       "      <th>...</th>\n",
       "      <th>radiance_5</th>\n",
       "      <th>view_zenith</th>\n",
       "      <th>elevation_km</th>\n",
       "      <th>doy</th>\n",
       "      <th>AOT</th>\n",
       "      <th>COT</th>\n",
       "      <th>vapor_gccm</th>\n",
       "      <th>ozone_cm</th>\n",
       "      <th>SZA</th>\n",
       "      <th>KG</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>0</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>5391</td>\n",
       "      <td>8</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2019-06-18 00:00:00</td>\n",
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       "      <td>2019-06-17 18:01:34.392</td>\n",
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       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>7055</td>\n",
       "      <td>8</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2019-10-03 00:00:00</td>\n",
       "      <td>2019-10-03</td>\n",
       "      <td>2019-10-02 18:01:34.392</td>\n",
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       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>2</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>11771</td>\n",
       "      <td>4</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-03 00:00:00</td>\n",
       "      <td>2020-08-03</td>\n",
       "      <td>2020-08-02 18:01:34.392</td>\n",
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       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>3</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>11862</td>\n",
       "      <td>7</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-08 00:00:00</td>\n",
       "      <td>2020-08-08</td>\n",
       "      <td>2020-08-07 18:01:34.392</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>221</td>\n",
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       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
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       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>4</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>11890</td>\n",
       "      <td>9</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-10 00:00:00</td>\n",
       "      <td>2020-08-10</td>\n",
       "      <td>2020-08-09 18:01:34.392</td>\n",
       "      <td>...</td>\n",
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       "      <td>680</td>\n",
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       "      <td>-89.5373</td>\n",
       "      <td>5391</td>\n",
       "      <td>8</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2019-06-18 00:00:00</td>\n",
       "      <td>2019-06-18</td>\n",
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       "      <td>73.660986</td>\n",
       "      <td>4.0</td>\n",
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       "      <td>685</td>\n",
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       "      <td>6</td>\n",
       "      <td>15TYM</td>\n",
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       "      <td>4.0</td>\n",
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       "    <tr>\n",
       "      <th>421</th>\n",
       "      <td>686</td>\n",
       "      <td>US-xUN</td>\n",
       "      <td>46.2339</td>\n",
       "      <td>-89.5373</td>\n",
       "      <td>12274</td>\n",
       "      <td>4</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-09-04 00:00:00</td>\n",
       "      <td>2020-09-04</td>\n",
       "      <td>2020-09-03 18:01:51.048</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>248</td>\n",
       "      <td>0.045513</td>\n",
       "      <td>28.339823</td>\n",
       "      <td>1.240811</td>\n",
       "      <td>0.333310</td>\n",
       "      <td>84.924138</td>\n",
       "      <td>4.0</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "<p>422 rows × 55 columns</p>\n",
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      ],
      "text/plain": [
       "     Unnamed: 0   tower      lat      lon  orbit  scene   tile  \\\n",
       "0             0  US-ALQ  46.0308 -89.6067   5391      8  15TYM   \n",
       "1             1  US-ALQ  46.0308 -89.6067   7055      8  15TYM   \n",
       "2             2  US-ALQ  46.0308 -89.6067  11771      4  15TYM   \n",
       "3             3  US-ALQ  46.0308 -89.6067  11862      7  15TYM   \n",
       "4             4  US-ALQ  46.0308 -89.6067  11890      9  15TYM   \n",
       "..          ...     ...      ...      ...    ...    ...    ...   \n",
       "417         679  US-xUK  39.0404 -95.1921  16810      8  15SUD   \n",
       "418         680  US-xUN  46.2339 -89.5373   5391      8  15TYM   \n",
       "419         681  US-xUN  46.2339 -89.5373   7055      8  15TYM   \n",
       "420         685  US-xUN  46.2339 -89.5373  12137      6  15TYM   \n",
       "421         686  US-xUN  46.2339 -89.5373  12274      4  15TYM   \n",
       "\n",
       "                time_UTC    date_UTC               time_solar  ... radiance_5  \\\n",
       "0    2019-06-18 00:00:00  2019-06-18  2019-06-17 18:01:34.392  ...        NaN   \n",
       "1    2019-10-03 00:00:00  2019-10-03  2019-10-02 18:01:34.392  ...        NaN   \n",
       "2    2020-08-03 00:00:00  2020-08-03  2020-08-02 18:01:34.392  ...        NaN   \n",
       "3    2020-08-08 00:00:00  2020-08-08  2020-08-07 18:01:34.392  ...        NaN   \n",
       "4    2020-08-10 00:00:00  2020-08-10  2020-08-09 18:01:34.392  ...        NaN   \n",
       "..                   ...         ...                      ...  ...        ...   \n",
       "417  2021-06-23 00:00:00  2021-06-23  2021-06-22 17:39:13.896  ...        NaN   \n",
       "418  2019-06-18 00:00:00  2019-06-18  2019-06-17 18:01:51.048  ...        NaN   \n",
       "419  2019-10-03 00:00:00  2019-10-03  2019-10-02 18:01:51.048  ...        NaN   \n",
       "420  2020-08-26 00:00:00  2020-08-26  2020-08-25 18:01:51.048  ...        NaN   \n",
       "421  2020-09-04 00:00:00  2020-09-04  2020-09-03 18:01:51.048  ...        NaN   \n",
       "\n",
       "     view_zenith  elevation_km  doy       AOT         COT  vapor_gccm  \\\n",
       "0            NaN           NaN  169       NaN         NaN         NaN   \n",
       "1            NaN           NaN  276       NaN         NaN         NaN   \n",
       "2            NaN           NaN  216       NaN         NaN         NaN   \n",
       "3            NaN           NaN  221       NaN         NaN         NaN   \n",
       "4            NaN           NaN  223       NaN         NaN         NaN   \n",
       "..           ...           ...  ...       ...         ...         ...   \n",
       "417          NaN           NaN  174  0.109902    0.010211    2.556485   \n",
       "418          NaN           NaN  169  0.136013  157.238358    2.565592   \n",
       "419          NaN           NaN  276  0.148899   61.517994    2.232357   \n",
       "420          NaN           NaN  239  0.659085   11.544897    2.780532   \n",
       "421          NaN           NaN  248  0.045513   28.339823    1.240811   \n",
       "\n",
       "     ozone_cm        SZA   KG  \n",
       "0         NaN        NaN  NaN  \n",
       "1         NaN        NaN  NaN  \n",
       "2         NaN        NaN  NaN  \n",
       "3         NaN        NaN  NaN  \n",
       "4         NaN        NaN  NaN  \n",
       "..        ...        ...  ...  \n",
       "417  0.321885  71.627640  4.0  \n",
       "418  0.347684  73.660986  4.0  \n",
       "419  0.245566  92.669251  4.0  \n",
       "420  0.274202  82.618719  4.0  \n",
       "421  0.333310  84.924138  4.0  \n",
       "\n",
       "[422 rows x 55 columns]"
      ]
     },
     "execution_count": 2,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "FLiES_inputs_df = pd.read_csv(\"ha2_FLiES_inputs.csv\")\n",
    "FLiES_inputs_df"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "Index(['Unnamed: 0', 'tower', 'lat', 'lon', 'orbit', 'scene', 'tile',\n",
       "       'time_UTC', 'date_UTC', 'time_solar', 'product', 'NDVI', 'NDVI-UQ',\n",
       "       'albedo', 'albedo-UQ', 'BESSinst', 'ESI', 'ESIdaily',\n",
       "       'ESIdailyUncertainty', 'ETdaily', 'ETdailyUncertainty',\n",
       "       'ETinstUncertainty', 'EmisWB', 'GPP', 'LST', 'LST_err', 'MOD16inst',\n",
       "       'PET', 'PTJPLSMcanopy', 'PTJPLSMinst', 'PTJPLSMinterception',\n",
       "       'PTJPLSMsoil', 'RH', 'Rg', 'Rn', 'SM', 'STICcanopy', 'STICinst', 'Ta',\n",
       "       'WUE', 'elevation_m', 'radiance_1', 'radiance_2', 'radiance_3',\n",
       "       'radiance_4', 'radiance_5', 'view_zenith', 'elevation_km', 'doy', 'AOT',\n",
       "       'COT', 'vapor_gccm', 'ozone_cm', 'SZA', 'KG'],\n",
       "      dtype='object')"
      ]
     },
     "execution_count": 3,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "FLiES_inputs_df.columns"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "14/14 [==============================] - 0s 505us/step\n"
     ]
    },
    {
     "data": {
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       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>Unnamed: 0</th>\n",
       "      <th>tower</th>\n",
       "      <th>lat</th>\n",
       "      <th>lon</th>\n",
       "      <th>orbit</th>\n",
       "      <th>scene</th>\n",
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       "      <th>fdnir</th>\n",
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       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
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       "      <th>1</th>\n",
       "      <td>1</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>7055</td>\n",
       "      <td>8</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2019-10-03 00:00:00</td>\n",
       "      <td>2019-10-03</td>\n",
       "      <td>2019-10-02 18:01:34.392</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>2</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>11771</td>\n",
       "      <td>4</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-03 00:00:00</td>\n",
       "      <td>2020-08-03</td>\n",
       "      <td>2020-08-02 18:01:34.392</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>3</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>11862</td>\n",
       "      <td>7</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-08 00:00:00</td>\n",
       "      <td>2020-08-08</td>\n",
       "      <td>2020-08-07 18:01:34.392</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>4</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>11890</td>\n",
       "      <td>9</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-10 00:00:00</td>\n",
       "      <td>2020-08-10</td>\n",
       "      <td>2020-08-09 18:01:34.392</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>...</th>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>417</th>\n",
       "      <td>679</td>\n",
       "      <td>US-xUK</td>\n",
       "      <td>39.0404</td>\n",
       "      <td>-95.1921</td>\n",
       "      <td>16810</td>\n",
       "      <td>8</td>\n",
       "      <td>15SUD</td>\n",
       "      <td>2021-06-23 00:00:00</td>\n",
       "      <td>2021-06-23</td>\n",
       "      <td>2021-06-22 17:39:13.896</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>418</th>\n",
       "      <td>680</td>\n",
       "      <td>US-xUN</td>\n",
       "      <td>46.2339</td>\n",
       "      <td>-89.5373</td>\n",
       "      <td>5391</td>\n",
       "      <td>8</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2019-06-18 00:00:00</td>\n",
       "      <td>2019-06-18</td>\n",
       "      <td>2019-06-17 18:01:51.048</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>419</th>\n",
       "      <td>681</td>\n",
       "      <td>US-xUN</td>\n",
       "      <td>46.2339</td>\n",
       "      <td>-89.5373</td>\n",
       "      <td>7055</td>\n",
       "      <td>8</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2019-10-03 00:00:00</td>\n",
       "      <td>2019-10-03</td>\n",
       "      <td>2019-10-02 18:01:51.048</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>420</th>\n",
       "      <td>685</td>\n",
       "      <td>US-xUN</td>\n",
       "      <td>46.2339</td>\n",
       "      <td>-89.5373</td>\n",
       "      <td>12137</td>\n",
       "      <td>6</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-26 00:00:00</td>\n",
       "      <td>2020-08-26</td>\n",
       "      <td>2020-08-25 18:01:51.048</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>421</th>\n",
       "      <td>686</td>\n",
       "      <td>US-xUN</td>\n",
       "      <td>46.2339</td>\n",
       "      <td>-89.5373</td>\n",
       "      <td>12274</td>\n",
       "      <td>4</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-09-04 00:00:00</td>\n",
       "      <td>2020-09-04</td>\n",
       "      <td>2020-09-03 18:01:51.048</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "<p>422 rows × 70 columns</p>\n",
       "</div>"
      ],
      "text/plain": [
       "     Unnamed: 0   tower      lat      lon  orbit  scene   tile  \\\n",
       "0             0  US-ALQ  46.0308 -89.6067   5391      8  15TYM   \n",
       "1             1  US-ALQ  46.0308 -89.6067   7055      8  15TYM   \n",
       "2             2  US-ALQ  46.0308 -89.6067  11771      4  15TYM   \n",
       "3             3  US-ALQ  46.0308 -89.6067  11862      7  15TYM   \n",
       "4             4  US-ALQ  46.0308 -89.6067  11890      9  15TYM   \n",
       "..          ...     ...      ...      ...    ...    ...    ...   \n",
       "417         679  US-xUK  39.0404 -95.1921  16810      8  15SUD   \n",
       "418         680  US-xUN  46.2339 -89.5373   5391      8  15TYM   \n",
       "419         681  US-xUN  46.2339 -89.5373   7055      8  15TYM   \n",
       "420         685  US-xUN  46.2339 -89.5373  12137      6  15TYM   \n",
       "421         686  US-xUN  46.2339 -89.5373  12274      4  15TYM   \n",
       "\n",
       "                time_UTC    date_UTC               time_solar  ... NIRdiff  \\\n",
       "0    2019-06-18 00:00:00  2019-06-18  2019-06-17 18:01:34.392  ...     NaN   \n",
       "1    2019-10-03 00:00:00  2019-10-03  2019-10-02 18:01:34.392  ...     NaN   \n",
       "2    2020-08-03 00:00:00  2020-08-03  2020-08-02 18:01:34.392  ...     NaN   \n",
       "3    2020-08-08 00:00:00  2020-08-08  2020-08-07 18:01:34.392  ...     NaN   \n",
       "4    2020-08-10 00:00:00  2020-08-10  2020-08-09 18:01:34.392  ...     NaN   \n",
       "..                   ...         ...                      ...  ...     ...   \n",
       "417  2021-06-23 00:00:00  2021-06-23  2021-06-22 17:39:13.896  ...     NaN   \n",
       "418  2019-06-18 00:00:00  2019-06-18  2019-06-17 18:01:51.048  ...     NaN   \n",
       "419  2019-10-03 00:00:00  2019-10-03  2019-10-02 18:01:51.048  ...     NaN   \n",
       "420  2020-08-26 00:00:00  2020-08-26  2020-08-25 18:01:51.048  ...     NaN   \n",
       "421  2020-09-04 00:00:00  2020-09-04  2020-09-03 18:01:51.048  ...     NaN   \n",
       "\n",
       "     VISdir  NIRdir  tm  puv  pvis  pnir  fduv  fdvis  fdnir  \n",
       "0       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "1       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "2       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "3       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "4       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "..      ...     ...  ..  ...   ...   ...   ...    ...    ...  \n",
       "417     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "418     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "419     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "420     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "421     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "\n",
       "[422 rows x 70 columns]"
      ]
     },
     "execution_count": 4,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "FLiES_outputs_df = process_FLiES_table(FLiES_inputs_df)\n",
    "FLiES_outputs_df"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "14/14 [==============================] - 0s 529us/step\n"
     ]
    },
    {
     "data": {
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       "      <th>Unnamed: 0</th>\n",
       "      <th>tower</th>\n",
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       "      <td>US-ALQ</td>\n",
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       "      <td>-89.6067</td>\n",
       "      <td>7055</td>\n",
       "      <td>8</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2019-10-03 00:00:00</td>\n",
       "      <td>2019-10-03</td>\n",
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       "      <td>NaN</td>\n",
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       "      <th>2</th>\n",
       "      <td>2</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>11771</td>\n",
       "      <td>4</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-03 00:00:00</td>\n",
       "      <td>2020-08-03</td>\n",
       "      <td>2020-08-02 18:01:34.392</td>\n",
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       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>3</td>\n",
       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>11862</td>\n",
       "      <td>7</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-08 00:00:00</td>\n",
       "      <td>2020-08-08</td>\n",
       "      <td>2020-08-07 18:01:34.392</td>\n",
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       "      <td>NaN</td>\n",
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       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
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       "      <th>4</th>\n",
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       "      <td>US-ALQ</td>\n",
       "      <td>46.0308</td>\n",
       "      <td>-89.6067</td>\n",
       "      <td>11890</td>\n",
       "      <td>9</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-10 00:00:00</td>\n",
       "      <td>2020-08-10</td>\n",
       "      <td>2020-08-09 18:01:34.392</td>\n",
       "      <td>...</td>\n",
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       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
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       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
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       "      <td>16810</td>\n",
       "      <td>8</td>\n",
       "      <td>15SUD</td>\n",
       "      <td>2021-06-23 00:00:00</td>\n",
       "      <td>2021-06-23</td>\n",
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       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
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       "      <th>418</th>\n",
       "      <td>680</td>\n",
       "      <td>US-xUN</td>\n",
       "      <td>46.2339</td>\n",
       "      <td>-89.5373</td>\n",
       "      <td>5391</td>\n",
       "      <td>8</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2019-06-18 00:00:00</td>\n",
       "      <td>2019-06-18</td>\n",
       "      <td>2019-06-17 18:01:51.048</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>419</th>\n",
       "      <td>681</td>\n",
       "      <td>US-xUN</td>\n",
       "      <td>46.2339</td>\n",
       "      <td>-89.5373</td>\n",
       "      <td>7055</td>\n",
       "      <td>8</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2019-10-03 00:00:00</td>\n",
       "      <td>2019-10-03</td>\n",
       "      <td>2019-10-02 18:01:51.048</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>420</th>\n",
       "      <td>685</td>\n",
       "      <td>US-xUN</td>\n",
       "      <td>46.2339</td>\n",
       "      <td>-89.5373</td>\n",
       "      <td>12137</td>\n",
       "      <td>6</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-08-26 00:00:00</td>\n",
       "      <td>2020-08-26</td>\n",
       "      <td>2020-08-25 18:01:51.048</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>421</th>\n",
       "      <td>686</td>\n",
       "      <td>US-xUN</td>\n",
       "      <td>46.2339</td>\n",
       "      <td>-89.5373</td>\n",
       "      <td>12274</td>\n",
       "      <td>4</td>\n",
       "      <td>15TYM</td>\n",
       "      <td>2020-09-04 00:00:00</td>\n",
       "      <td>2020-09-04</td>\n",
       "      <td>2020-09-03 18:01:51.048</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "<p>422 rows × 70 columns</p>\n",
       "</div>"
      ],
      "text/plain": [
       "     Unnamed: 0   tower      lat      lon  orbit  scene   tile  \\\n",
       "0             0  US-ALQ  46.0308 -89.6067   5391      8  15TYM   \n",
       "1             1  US-ALQ  46.0308 -89.6067   7055      8  15TYM   \n",
       "2             2  US-ALQ  46.0308 -89.6067  11771      4  15TYM   \n",
       "3             3  US-ALQ  46.0308 -89.6067  11862      7  15TYM   \n",
       "4             4  US-ALQ  46.0308 -89.6067  11890      9  15TYM   \n",
       "..          ...     ...      ...      ...    ...    ...    ...   \n",
       "417         679  US-xUK  39.0404 -95.1921  16810      8  15SUD   \n",
       "418         680  US-xUN  46.2339 -89.5373   5391      8  15TYM   \n",
       "419         681  US-xUN  46.2339 -89.5373   7055      8  15TYM   \n",
       "420         685  US-xUN  46.2339 -89.5373  12137      6  15TYM   \n",
       "421         686  US-xUN  46.2339 -89.5373  12274      4  15TYM   \n",
       "\n",
       "                time_UTC    date_UTC               time_solar  ... NIRdiff  \\\n",
       "0    2019-06-18 00:00:00  2019-06-18  2019-06-17 18:01:34.392  ...     NaN   \n",
       "1    2019-10-03 00:00:00  2019-10-03  2019-10-02 18:01:34.392  ...     NaN   \n",
       "2    2020-08-03 00:00:00  2020-08-03  2020-08-02 18:01:34.392  ...     NaN   \n",
       "3    2020-08-08 00:00:00  2020-08-08  2020-08-07 18:01:34.392  ...     NaN   \n",
       "4    2020-08-10 00:00:00  2020-08-10  2020-08-09 18:01:34.392  ...     NaN   \n",
       "..                   ...         ...                      ...  ...     ...   \n",
       "417  2021-06-23 00:00:00  2021-06-23  2021-06-22 17:39:13.896  ...     NaN   \n",
       "418  2019-06-18 00:00:00  2019-06-18  2019-06-17 18:01:51.048  ...     NaN   \n",
       "419  2019-10-03 00:00:00  2019-10-03  2019-10-02 18:01:51.048  ...     NaN   \n",
       "420  2020-08-26 00:00:00  2020-08-26  2020-08-25 18:01:51.048  ...     NaN   \n",
       "421  2020-09-04 00:00:00  2020-09-04  2020-09-03 18:01:51.048  ...     NaN   \n",
       "\n",
       "     VISdir  NIRdir  tm  puv  pvis  pnir  fduv  fdvis  fdnir  \n",
       "0       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "1       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "2       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "3       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "4       NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "..      ...     ...  ..  ...   ...   ...   ...    ...    ...  \n",
       "417     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "418     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "419     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "420     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "421     NaN     NaN NaN  NaN   NaN   NaN   NaN    NaN    NaN  \n",
       "\n",
       "[422 rows x 70 columns]"
      ]
     },
     "execution_count": 5,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "FLiES_outputs_df = process_FLiES_table(FLiES_inputs_df)\n",
    "FLiES_outputs_df.to_csv(\"ha2_FLiES_outputs.csv\")\n",
    "FLiES_outputs_df"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "Index(['Unnamed: 0', 'tower', 'lat', 'lon', 'orbit', 'scene', 'tile',\n",
       "       'time_UTC', 'date_UTC', 'time_solar', 'product', 'NDVI', 'NDVI-UQ',\n",
       "       'albedo', 'albedo-UQ', 'BESSinst', 'ESI', 'ESIdaily',\n",
       "       'ESIdailyUncertainty', 'ETdaily', 'ETdailyUncertainty',\n",
       "       'ETinstUncertainty', 'EmisWB', 'GPP', 'LST', 'LST_err', 'MOD16inst',\n",
       "       'PET', 'PTJPLSMcanopy', 'PTJPLSMinst', 'PTJPLSMinterception',\n",
       "       'PTJPLSMsoil', 'RH', 'Rg', 'Rn', 'SM', 'STICcanopy', 'STICinst', 'Ta',\n",
       "       'WUE', 'elevation_m', 'radiance_1', 'radiance_2', 'radiance_3',\n",
       "       'radiance_4', 'radiance_5', 'view_zenith', 'elevation_km', 'doy', 'AOT',\n",
       "       'COT', 'vapor_gccm', 'ozone_cm', 'SZA', 'KG', 'Ra', 'UV', 'VIS', 'NIR',\n",
       "       'VISdiff', 'NIRdiff', 'VISdir', 'NIRdir', 'tm', 'puv', 'pvis', 'pnir',\n",
       "       'fduv', 'fdvis', 'fdnir'],\n",
       "      dtype='object')"
      ]
     },
     "execution_count": 6,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "FLiES_outputs_df.columns"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
  }
 ],
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