diff --git a/mimic-iv/buildmimic/sqlite/import.py b/mimic-iv/buildmimic/sqlite/import.py index bf93e251..02b4f0b3 100644 --- a/mimic-iv/buildmimic/sqlite/import.py +++ b/mimic-iv/buildmimic/sqlite/import.py @@ -97,10 +97,14 @@ def main(): sys.exit() # subselect to only tables in the above list + ignored_files = set([f for f, t in zip(data_files, tablenames) if t not in _MIMIC_TABLES]) data_files = [f for f, t in zip(data_files, tablenames) if t in _MIMIC_TABLES] tablenames = [t for t in tablenames if t in _MIMIC_TABLES] print(f"Importing {len(tablenames)} files.") + if ignored_files: + print(f"Ignoring {len(ignored_files)} files: {ignored_files}") + pt = None subjects = None if args.limit > 0: