diff --git a/.gitignore b/.gitignore index 1ccf35a8..1d17a73e 100644 --- a/.gitignore +++ b/.gitignore @@ -27,6 +27,7 @@ var/ *.egg-info/ .installed.cfg *.egg +#resources.csv # PyInstaller # Usually these files are written by a python script from a template @@ -54,6 +55,7 @@ coverage.xml # Django stuff: *.log +migrations/ # Sphinx documentation docs/_build/ @@ -110,5 +112,13 @@ com_crashlytics_export_strings.xml crashlytics.properties crashlytics-build.properties +## Visual Studio Code +.vscode/ +## Miscellaneous +resources.csv +# Docker +Dockerfile +docker-start.sh +docker-compose.yml diff --git a/requirements.txt b/requirements.txt index 39346d35..270c9110 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,7 +1,7 @@ beautifulsoup4==4.5.1 codegen==1.0 coverage==4.2 -Django==1.10.3 +Django==1.11.11 django-debug-toolbar==1.6 django-discover-runner==1.0 django-webtest==1.8.0 @@ -15,3 +15,8 @@ sqlparse==0.2.2 waitress==1.0.1 WebOb==1.6.2 WebTest==2.0.23 +requests==2.18.4 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Null,http://www.hydroshare.org/hsapi/resource/04cd8806e8ca45eeb05ff000ac28f2ff/map/,True,"Identifying street gutters used for secondary water delivery in urbanized areas of Cache Valley, UT",False,True,True,10-29-2017,http://www.hydroshare.org/resource/04cd8806e8ca45eeb05ff000ac28f2ff/,True,GeographicFeatureResource +[],97bc9a2f24294ca9894473d0d0cfb241,10-29-2017,http://www.hydroshare.org/django_irods/download/bags/97bc9a2f24294ca9894473d0d0cfb241.zip,http://www.hydroshare.org/hsapi/resource/97bc9a2f24294ca9894473d0d0cfb241/scimeta/,David Tarboton,http://www.hydroshare.org/hsapi/resource/97bc9a2f24294ca9894473d0d0cfb241/map/,False,Assorted file types for testing composite resource functionality,True,True,False,10-29-2017,http://www.hydroshare.org/resource/97bc9a2f24294ca9894473d0d0cfb241/,True,CompositeResource 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SantaCruzdemo,True,True,False,11-03-2017,http://www.hydroshare.org/resource/05a2f51dc18741c79aa7da33be08c59c/,True,GenericResource +[],c597c65168da4967a165ab7af12d0df0,11-03-2017,http://www.hydroshare.org/django_irods/download/bags/c597c65168da4967a165ab7af12d0df0.zip,http://www.hydroshare.org/hsapi/resource/c597c65168da4967a165ab7af12d0df0/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/c597c65168da4967a165ab7af12d0df0/map/,False,This is geospatial files prepared using HydroTops for SantaCruzdemo,True,True,False,11-03-2017,http://www.hydroshare.org/resource/c597c65168da4967a165ab7af12d0df0/,True,GenericResource +[],9b07b41dc62e4dad808400881fb5dcee,11-03-2017,http://www.hydroshare.org/django_irods/download/bags/9b07b41dc62e4dad808400881fb5dcee.zip,http://www.hydroshare.org/hsapi/resource/9b07b41dc62e4dad808400881fb5dcee/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/9b07b41dc62e4dad808400881fb5dcee/map/,False,This is geospatial files prepared using HydroTops for SantaCruzdemo,True,True,False,11-03-2017,http://www.hydroshare.org/resource/9b07b41dc62e4dad808400881fb5dcee/,True,GenericResource +[],bf168911736f449d87b3fce22e3edb19,11-03-2017,http://www.hydroshare.org/django_irods/download/bags/bf168911736f449d87b3fce22e3edb19.zip,http://www.hydroshare.org/hsapi/resource/bf168911736f449d87b3fce22e3edb19/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/bf168911736f449d87b3fce22e3edb19/map/,False,This is geospatial files prepared using HydroTops for SantaCruzdemo,True,True,False,11-03-2017,http://www.hydroshare.org/resource/bf168911736f449d87b3fce22e3edb19/,True,GenericResource +"[{u'type': u'period', u'value': {u'start': u'2008-01-01 00:00:00', u'end': u'2008-01-31 00:00:00'}}, {u'type': u'box', u'value': {u'northlimit': 41.718473, u'projection': u'Unknown', u'units': u'Decimal degrees', u'southlimit': 41.495409, u'eastlimit': -111.799324, u'westlimit': 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SantaCruzdemo,True,True,False,11-04-2017,http://www.hydroshare.org/resource/f99ec0ac130d465fa69021de4647a485/,True,GenericResource +[],f354d61a2c86450fa23579faa7d08154,11-04-2017,http://www.hydroshare.org/django_irods/download/bags/f354d61a2c86450fa23579faa7d08154.zip,http://www.hydroshare.org/hsapi/resource/f354d61a2c86450fa23579faa7d08154/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/f354d61a2c86450fa23579faa7d08154/map/,False,This is geospatial files prepared using HydroTops for SantaCruzdemo,True,True,False,11-04-2017,http://www.hydroshare.org/resource/f354d61a2c86450fa23579faa7d08154/,True,GenericResource +[],a6b63e8caeae4b26bea28ba6b4caa780,11-04-2017,http://www.hydroshare.org/django_irods/download/bags/a6b63e8caeae4b26bea28ba6b4caa780.zip,http://www.hydroshare.org/hsapi/resource/a6b63e8caeae4b26bea28ba6b4caa780/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/a6b63e8caeae4b26bea28ba6b4caa780/map/,False,This is geospatial files prepared using HydroTops for SantaCruzdemo,True,True,False,11-04-2017,http://www.hydroshare.org/resource/a6b63e8caeae4b26bea28ba6b4caa780/,True,GenericResource +[],385199a2aaed45efa009cd892b064f3b,11-04-2017,http://www.hydroshare.org/django_irods/download/bags/385199a2aaed45efa009cd892b064f3b.zip,http://www.hydroshare.org/hsapi/resource/385199a2aaed45efa009cd892b064f3b/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/385199a2aaed45efa009cd892b064f3b/map/,False,This is geospatial files prepared using HydroTops for SantaCruzdemo,True,True,False,11-04-2017,http://www.hydroshare.org/resource/385199a2aaed45efa009cd892b064f3b/,True,GenericResource +[],7506d267698b4fe48d77f5c9e165170a,11-04-2017,http://www.hydroshare.org/django_irods/download/bags/7506d267698b4fe48d77f5c9e165170a.zip,http://www.hydroshare.org/hsapi/resource/7506d267698b4fe48d77f5c9e165170a/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/7506d267698b4fe48d77f5c9e165170a/map/,False,This is Terrain files prepared using HydroTops for SantaCruzdemo,True,True,False,11-04-2017,http://www.hydroshare.org/resource/7506d267698b4fe48d77f5c9e165170a/,True,GenericResource +"[{u'type': u'point', u'value': {u'units': u'Decimal degrees', u'east': -111.8483, u'north': 40.7667, u'name': u'Near FASB building on UU campus', u'projection': u'WGS 84 EPSG:4326'}}, {u'type': u'period', u'value': {u'start': u'2015-10-01', u'end': u'2016-09-09'}}]",0a2ec1696e2842548c9a8103edc55c9b,11-05-2017,http://www.hydroshare.org/django_irods/download/bags/0a2ec1696e2842548c9a8103edc55c9b.zip,http://www.hydroshare.org/hsapi/resource/0a2ec1696e2842548c9a8103edc55c9b/scimeta/,Erik Oerter,http://www.hydroshare.org/hsapi/resource/0a2ec1696e2842548c9a8103edc55c9b/map/,True,In situ measurements of soil and vadose zone water isotopes reveal water storage and fluxes in semi-aird ecosystems,False,True,True,11-04-2017,http://www.hydroshare.org/resource/0a2ec1696e2842548c9a8103edc55c9b/,True,GenericResource +"[{u'type': u'box', u'value': {u'northlimit': 42.0500287858, u'projection': u'WGS 84 EPSG:4326', u'units': u'Decimal degrees', u'southlimit': 41.46101782271056, u'eastlimit': -111.40051926333071, u'westlimit': -111.79812580632701}}]",9cc7a28a95cb4ecdbb258b10847e429d,11-06-2017,http://www.hydroshare.org/django_irods/download/bags/9cc7a28a95cb4ecdbb258b10847e429d.zip,http://www.hydroshare.org/hsapi/resource/9cc7a28a95cb4ecdbb258b10847e429d/scimeta/,Jeffery Horsburgh,http://www.hydroshare.org/hsapi/resource/9cc7a28a95cb4ecdbb258b10847e429d/map/,False,A demo composite resource,True,True,False,11-04-2017,http://www.hydroshare.org/resource/9cc7a28a95cb4ecdbb258b10847e429d/,True,CompositeResource +[],137b90c355264fe48e0c480ab0af8458,11-06-2017,http://www.hydroshare.org/django_irods/download/bags/137b90c355264fe48e0c480ab0af8458.zip,http://www.hydroshare.org/hsapi/resource/137b90c355264fe48e0c480ab0af8458/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/137b90c355264fe48e0c480ab0af8458/map/,False,Model files for PyTOPKAPI simulation of Plungedemo,True,True,False,11-06-2017,http://www.hydroshare.org/resource/137b90c355264fe48e0c480ab0af8458/,True,GenericResource +[],93471db0c2c04438b4c09aa5dc538e70,11-06-2017,http://www.hydroshare.org/django_irods/download/bags/93471db0c2c04438b4c09aa5dc538e70.zip,http://www.hydroshare.org/hsapi/resource/93471db0c2c04438b4c09aa5dc538e70/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/93471db0c2c04438b4c09aa5dc538e70/map/,False,Model files for PyTOPKAPI simulation of Plungedemo,True,True,False,11-06-2017,http://www.hydroshare.org/resource/93471db0c2c04438b4c09aa5dc538e70/,True,GenericResource +[],9ede93d859bb43488f8ea03de3278634,11-06-2017,http://www.hydroshare.org/django_irods/download/bags/9ede93d859bb43488f8ea03de3278634.zip,http://www.hydroshare.org/hsapi/resource/9ede93d859bb43488f8ea03de3278634/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/9ede93d859bb43488f8ea03de3278634/map/,False,Model files for PyTOPKAPI simulation of Plunge201011demo,True,True,False,11-06-2017,http://www.hydroshare.org/resource/9ede93d859bb43488f8ea03de3278634/,True,GenericResource +"[{u'type': u'box', u'value': {u'northlimit': 38.79193820698017, u'projection': u'WGS 84 EPSG:4326', u'units': u'Decimal degrees', u'southlimit': 38.732745995825006, u'eastlimit': -89.93378684976602, u'westlimit': -90.00874548846114}}]",0cd9811fd2e546d9a1aeb4a95a574995,11-08-2017,http://www.hydroshare.org/django_irods/download/bags/0cd9811fd2e546d9a1aeb4a95a574995.zip,http://www.hydroshare.org/hsapi/resource/0cd9811fd2e546d9a1aeb4a95a574995/scimeta/,Jim Nelson,http://www.hydroshare.org/hsapi/resource/0cd9811fd2e546d9a1aeb4a95a574995/map/,False,Judy's Branch,True,True,False,11-06-2017,http://www.hydroshare.org/resource/0cd9811fd2e546d9a1aeb4a95a574995/,True,GeographicFeatureResource +[],9e792d58b2594469afd4308f8fa49492,11-07-2017,http://www.hydroshare.org/django_irods/download/bags/9e792d58b2594469afd4308f8fa49492.zip,http://www.hydroshare.org/hsapi/resource/9e792d58b2594469afd4308f8fa49492/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/9e792d58b2594469afd4308f8fa49492/map/,False,Model files for PyTOPKAPI simulation of SantaCruzdemo,True,True,False,11-07-2017,http://www.hydroshare.org/resource/9e792d58b2594469afd4308f8fa49492/,True,GenericResource +[],89fbfb80f8c74d188d3096cd3e87dd02,11-07-2017,http://www.hydroshare.org/django_irods/download/bags/89fbfb80f8c74d188d3096cd3e87dd02.zip,http://www.hydroshare.org/hsapi/resource/89fbfb80f8c74d188d3096cd3e87dd02/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/89fbfb80f8c74d188d3096cd3e87dd02/map/,False,Model files for PyTOPKAPI simulation of SantaCruzdemo,True,True,False,11-07-2017,http://www.hydroshare.org/resource/89fbfb80f8c74d188d3096cd3e87dd02/,True,GenericResource +[],9ead84550ffd421c873a7511381cd6dc,11-07-2017,http://www.hydroshare.org/django_irods/download/bags/9ead84550ffd421c873a7511381cd6dc.zip,http://www.hydroshare.org/hsapi/resource/9ead84550ffd421c873a7511381cd6dc/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/9ead84550ffd421c873a7511381cd6dc/map/,False,Model files for PyTOPKAPI simulation of SantaCruzdemo,True,True,False,11-07-2017,http://www.hydroshare.org/resource/9ead84550ffd421c873a7511381cd6dc/,True,GenericResource +[],9612dfd6a50c4a9194d9ed7e8956f555,11-09-2017,http://www.hydroshare.org/django_irods/download/bags/9612dfd6a50c4a9194d9ed7e8956f555.zip,http://www.hydroshare.org/hsapi/resource/9612dfd6a50c4a9194d9ed7e8956f555/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/9612dfd6a50c4a9194d9ed7e8956f555/map/,True,Model files for PyTOPKAPI simulation of SantaCruzdemo,False,True,True,11-07-2017,http://www.hydroshare.org/resource/9612dfd6a50c4a9194d9ed7e8956f555/,True,GenericResource +[],f72f6f09401141179cd9c91567a7d9a8,11-10-2017,http://www.hydroshare.org/django_irods/download/bags/f72f6f09401141179cd9c91567a7d9a8.zip,http://www.hydroshare.org/hsapi/resource/f72f6f09401141179cd9c91567a7d9a8/scimeta/,Edward Morgan,http://www.hydroshare.org/hsapi/resource/f72f6f09401141179cd9c91567a7d9a8/map/,False,MODFLOW2005 Test #1,True,True,False,11-07-2017,http://www.hydroshare.org/resource/f72f6f09401141179cd9c91567a7d9a8/,True,MODFLOWModelInstanceResource +[],00dda61694e949439957b8b536106db9,11-29-2017,http://www.hydroshare.org/django_irods/download/bags/00dda61694e949439957b8b536106db9.zip,http://www.hydroshare.org/hsapi/resource/00dda61694e949439957b8b536106db9/scimeta/,Timothy DeWeese ,http://www.hydroshare.org/hsapi/resource/00dda61694e949439957b8b536106db9/map/,True,Data and Numerical code for monitoring streambed scour/deposition with streamwater temperature as a tracer,False,True,True,11-08-2017,http://www.hydroshare.org/resource/00dda61694e949439957b8b536106db9/,True,CompositeResource +[],0c6519de865c4ce78c28c9fae54b82c8,11-09-2017,http://www.hydroshare.org/django_irods/download/bags/0c6519de865c4ce78c28c9fae54b82c8.zip,http://www.hydroshare.org/hsapi/resource/0c6519de865c4ce78c28c9fae54b82c8/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/0c6519de865c4ce78c28c9fae54b82c8/map/,True,Model files for PyTOPKAPI simulation of Plungedemo,False,True,True,11-08-2017,http://www.hydroshare.org/resource/0c6519de865c4ce78c28c9fae54b82c8/,True,GenericResource +[],7c54189ea9ed4ac7b6eb73b1d6ec985d,11-10-2017,http://www.hydroshare.org/django_irods/download/bags/7c54189ea9ed4ac7b6eb73b1d6ec985d.zip,http://www.hydroshare.org/hsapi/resource/7c54189ea9ed4ac7b6eb73b1d6ec985d/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/7c54189ea9ed4ac7b6eb73b1d6ec985d/map/,True,This is terrain files prepared using HydroTops for BagmatiRiverkathmandu,False,True,True,11-08-2017,http://www.hydroshare.org/resource/7c54189ea9ed4ac7b6eb73b1d6ec985d/,True,GenericResource +[],77ea07c0ecfd43918e6cffa3b27c27cd,11-08-2017,http://www.hydroshare.org/django_irods/download/bags/77ea07c0ecfd43918e6cffa3b27c27cd.zip,http://www.hydroshare.org/hsapi/resource/77ea07c0ecfd43918e6cffa3b27c27cd/scimeta/,Matthew Bayles,http://www.hydroshare.org/hsapi/resource/77ea07c0ecfd43918e6cffa3b27c27cd/map/,False,NWM subset: 2017-11-07 to 2017-11-08 Analysis and Assimilation Forcing files for region - Michigan,True,True,False,11-08-2017,http://www.hydroshare.org/resource/77ea07c0ecfd43918e6cffa3b27c27cd/,True,CompositeResource +"[{u'type': u'box', u'value': {u'northlimit': 41.802, u'projection': u'WGS 84 EPSG:4326', u'name': u'Logan, Utah', u'units': u'Decimal degrees', u'southlimit': 41.7162, u'eastlimit': -111.7919, u'westlimit': -111.852}}]",d13a0e64602a450a8573c778c2e711e5,11-08-2017,http://www.hydroshare.org/django_irods/download/bags/d13a0e64602a450a8573c778c2e711e5.zip,http://www.hydroshare.org/hsapi/resource/d13a0e64602a450a8573c778c2e711e5/scimeta/,Caleb Buahin,http://www.hydroshare.org/hsapi/resource/d13a0e64602a450a8573c778c2e711e5/map/,False,A High Resolution SWMM Model for the City of Logan Utah,True,True,False,11-08-2017,http://www.hydroshare.org/resource/d13a0e64602a450a8573c778c2e711e5/,False,ModelInstanceResource +"[{u'type': u'period', u'value': {u'start': u'2017-06-29 23:00:00', u'end': u'2017-06-30 00:00:00'}}, {u'type': u'box', u'value': {u'northlimit': 52.0525, u'projection': u'WGS 84 EPSG:4326', u'units': u'Decimal degrees', u'southlimit': 22.9179, u'eastlimit': -60.2051, u'westlimit': -130.166}}]",bb42e798da1c48c69f9c1c4d5d33b3f6,11-09-2017,http://www.hydroshare.org/django_irods/download/bags/bb42e798da1c48c69f9c1c4d5d33b3f6.zip,http://www.hydroshare.org/hsapi/resource/bb42e798da1c48c69f9c1c4d5d33b3f6/scimeta/,Irene Garousi-Nejad,http://www.hydroshare.org/hsapi/resource/bb42e798da1c48c69f9c1c4d5d33b3f6/map/,False,National Water Model forcing visualization using mpl_toolkits.basemap,True,True,False,11-09-2017,http://www.hydroshare.org/resource/bb42e798da1c48c69f9c1c4d5d33b3f6/,True,NetcdfResource +[],4b2e130625464232bd3a58c886eb8fc6,11-10-2017,http://www.hydroshare.org/django_irods/download/bags/4b2e130625464232bd3a58c886eb8fc6.zip,http://www.hydroshare.org/hsapi/resource/4b2e130625464232bd3a58c886eb8fc6/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/4b2e130625464232bd3a58c886eb8fc6/map/,True,Input-files for TOPNET model of topnet_demo,False,True,True,11-09-2017,http://www.hydroshare.org/resource/4b2e130625464232bd3a58c886eb8fc6/,True,GenericResource +[],955d72a9b00141548aca582c493ee140,11-09-2017,http://www.hydroshare.org/django_irods/download/bags/955d72a9b00141548aca582c493ee140.zip,http://www.hydroshare.org/hsapi/resource/955d72a9b00141548aca582c493ee140/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/955d72a9b00141548aca582c493ee140/map/,False,Input-files for TOPNET model for Logan_TOPNET_2014,True,True,False,11-09-2017,http://www.hydroshare.org/resource/955d72a9b00141548aca582c493ee140/,True,GenericResource +[],a3552bea9df243be822a61349a200ece,11-10-2017,http://www.hydroshare.org/django_irods/download/bags/a3552bea9df243be822a61349a200ece.zip,http://www.hydroshare.org/hsapi/resource/a3552bea9df243be822a61349a200ece/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/a3552bea9df243be822a61349a200ece/map/,True,"This is terrain,soil,forcing files prepared using HydroTops for MillCreekIL2010",False,True,True,11-09-2017,http://www.hydroshare.org/resource/a3552bea9df243be822a61349a200ece/,True,GenericResource +[],ca5f9b6aea8d4012823303fb5fc6eb5f,11-09-2017,http://www.hydroshare.org/django_irods/download/bags/ca5f9b6aea8d4012823303fb5fc6eb5f.zip,http://www.hydroshare.org/hsapi/resource/ca5f9b6aea8d4012823303fb5fc6eb5f/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/ca5f9b6aea8d4012823303fb5fc6eb5f/map/,False,Model files for PyTOPKAPI simulation of MillCreekIL2010,True,True,False,11-09-2017,http://www.hydroshare.org/resource/ca5f9b6aea8d4012823303fb5fc6eb5f/,True,GenericResource +"[{u'type': u'point', u'value': {u'units': u'Decimal degrees', u'east': -75.78327048, u'north': 39.8585627, u'projection': u'WGS 84 EPSG:4326', u'name': u'WCC0: White Clay Creek at Spencer Road near Avondale PA'}}, {u'type': u'period', u'value': {u'start': u'1968-05-21', u'end': u'2014-12-31'}}]",0886014659d443d4a2b9b189c96bab68,11-13-2017,http://www.hydroshare.org/django_irods/download/bags/0886014659d443d4a2b9b189c96bab68.zip,http://www.hydroshare.org/hsapi/resource/0886014659d443d4a2b9b189c96bab68/scimeta/,Denis Newbold,http://www.hydroshare.org/hsapi/resource/0886014659d443d4a2b9b189c96bab68/map/,False,"White Clay Creek - Stage, Streamflow / Discharge (1968-2014)",True,True,False,11-09-2017,http://www.hydroshare.org/resource/0886014659d443d4a2b9b189c96bab68/,True,CompositeResource +[],34c1783cb7f348a1af5ba6f9662291ad,11-10-2017,http://www.hydroshare.org/django_irods/download/bags/34c1783cb7f348a1af5ba6f9662291ad.zip,http://www.hydroshare.org/hsapi/resource/34c1783cb7f348a1af5ba6f9662291ad/scimeta/,Edward Morgan,http://www.hydroshare.org/hsapi/resource/34c1783cb7f348a1af5ba6f9662291ad/map/,False,MODFLOW2005 Test #2,True,True,False,11-10-2017,http://www.hydroshare.org/resource/34c1783cb7f348a1af5ba6f9662291ad/,True,ModelInstanceResource +[],63164830979148a0b8642bd308e5dbe4,11-10-2017,http://www.hydroshare.org/django_irods/download/bags/63164830979148a0b8642bd308e5dbe4.zip,http://www.hydroshare.org/hsapi/resource/63164830979148a0b8642bd308e5dbe4/scimeta/,David Tarboton,http://www.hydroshare.org/hsapi/resource/63164830979148a0b8642bd308e5dbe4/map/,False,"University of Virginia Seminar 11/10/17, ""Advancing Hydrology through Collaborative Data and Model Sharing using HydroShare""",True,True,False,11-10-2017,http://www.hydroshare.org/resource/63164830979148a0b8642bd308e5dbe4/,True,CompositeResource +[],c964080859a645499686c9632e5eb34d,11-10-2017,http://www.hydroshare.org/django_irods/download/bags/c964080859a645499686c9632e5eb34d.zip,http://www.hydroshare.org/hsapi/resource/c964080859a645499686c9632e5eb34d/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/c964080859a645499686c9632e5eb34d/map/,False,Model files for PyTOPKAPI simulation of DeepCreekpalmCA2010,True,True,False,11-10-2017,http://www.hydroshare.org/resource/c964080859a645499686c9632e5eb34d/,True,GenericResource +"[{u'type': u'box', u'value': {u'northlimit': 30.24793709200003, u'projection': u'WGS 84 EPSG:4326', u'units': u'Decimal degrees', u'southlimit': 30.031780983000033, u'eastlimit': -97.68025283099998, u'westlimit': -98.28321997799996}}]",23b8c221ebea4b93a90e22031735c530,11-22-2017,http://www.hydroshare.org/django_irods/download/bags/23b8c221ebea4b93a90e22031735c530.zip,http://www.hydroshare.org/hsapi/resource/23b8c221ebea4b93a90e22031735c530/scimeta/,Dave Tarboton,http://www.hydroshare.org/hsapi/resource/23b8c221ebea4b93a90e22031735c530/map/,False,Flow lines Onion Creek Texas,True,True,False,11-10-2017,http://www.hydroshare.org/resource/23b8c221ebea4b93a90e22031735c530/,True,GeographicFeatureResource +[],0341413e503b4bd2b627ee8874ed5181,11-10-2017,http://www.hydroshare.org/django_irods/download/bags/0341413e503b4bd2b627ee8874ed5181.zip,http://www.hydroshare.org/hsapi/resource/0341413e503b4bd2b627ee8874ed5181/scimeta/,Edward Morgan,http://www.hydroshare.org/hsapi/resource/0341413e503b4bd2b627ee8874ed5181/map/,False,MODFLOW2005 Test #3,True,True,False,11-10-2017,http://www.hydroshare.org/resource/0341413e503b4bd2b627ee8874ed5181/,True,MODFLOWModelInstanceResource +[],2c0ee8d98a564a7a8befce674210f142,11-11-2017,http://www.hydroshare.org/django_irods/download/bags/2c0ee8d98a564a7a8befce674210f142.zip,http://www.hydroshare.org/hsapi/resource/2c0ee8d98a564a7a8befce674210f142/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/2c0ee8d98a564a7a8befce674210f142/map/,False,Model files for PyTOPKAPI simulation of SantaCruzWithIniti,True,True,False,11-11-2017,http://www.hydroshare.org/resource/2c0ee8d98a564a7a8befce674210f142/,True,GenericResource 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u'value': {u'units': u'WGS 84 EPSG:4326', u'east': -70.361013, u'north': 44.338919, u'projection': u'WGS 84 EPSG:4326'}}, {u'type': u'period', u'value': {u'start': u'1948-01-01T00:00:00', u'end': u'2003-12-31T00:00:00'}}]",bce7694685874d85812f13df82bd6f33,11-12-2017,http://www.hydroshare.org/django_irods/download/bags/bce7694685874d85812f13df82bd6f33.zip,http://www.hydroshare.org/hsapi/resource/bce7694685874d85812f13df82bd6f33/scimeta/,John Schaake,http://www.hydroshare.org/hsapi/resource/bce7694685874d85812f13df82bd6f33/map/,False,MOPEX Gage 01060000 Daily Mean Areal Maximum Temperature,True,True,False,11-12-2017,http://www.hydroshare.org/resource/bce7694685874d85812f13df82bd6f33/,True,RefTimeSeriesResource +[],4368e79137f743ac96700f176a7ed6e5,11-14-2017,http://www.hydroshare.org/django_irods/download/bags/4368e79137f743ac96700f176a7ed6e5.zip,http://www.hydroshare.org/hsapi/resource/4368e79137f743ac96700f176a7ed6e5/scimeta/,Christina Bandaragoda,http://www.hydroshare.org/hsapi/resource/4368e79137f743ac96700f176a7ed6e5/map/,False,A Hydroinformatics poem for Jill Deines,True,True,False,11-12-2017,http://www.hydroshare.org/resource/4368e79137f743ac96700f176a7ed6e5/,True,CompositeResource +[],a3ab97dd84d04263a91455b31a48ebaf,11-13-2017,http://www.hydroshare.org/django_irods/download/bags/a3ab97dd84d04263a91455b31a48ebaf.zip,http://www.hydroshare.org/hsapi/resource/a3ab97dd84d04263a91455b31a48ebaf/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/a3ab97dd84d04263a91455b31a48ebaf/map/,False,This is terrain files prepared using HydroTops for SantaCruzdemo,True,True,False,11-13-2017,http://www.hydroshare.org/resource/a3ab97dd84d04263a91455b31a48ebaf/,True,GenericResource +[],b6e1de01676447049ba09119e5aa9999,11-13-2017,http://www.hydroshare.org/django_irods/download/bags/b6e1de01676447049ba09119e5aa9999.zip,http://www.hydroshare.org/hsapi/resource/b6e1de01676447049ba09119e5aa9999/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/b6e1de01676447049ba09119e5aa9999/map/,False,This is terrain files prepared using HydroTops for sanmarcosterrain,True,True,False,11-13-2017,http://www.hydroshare.org/resource/b6e1de01676447049ba09119e5aa9999/,True,GenericResource +[],a678c41ec3d64e14a6f607f1a79b4d6d,11-13-2017,http://www.hydroshare.org/django_irods/download/bags/a678c41ec3d64e14a6f607f1a79b4d6d.zip,http://www.hydroshare.org/hsapi/resource/a678c41ec3d64e14a6f607f1a79b4d6d/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/a678c41ec3d64e14a6f607f1a79b4d6d/map/,False,This is terrain files prepared using HydroTops for sanmarcosterrainshp,True,True,False,11-13-2017,http://www.hydroshare.org/resource/a678c41ec3d64e14a6f607f1a79b4d6d/,True,GenericResource 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SanMarcosshpdownload,True,True,False,11-13-2017,http://www.hydroshare.org/resource/05df4ee1fc844321a7b3f265e75da495/,True,GenericResource +[],4ed71909c5f2408dad677a462119608a,11-13-2017,http://www.hydroshare.org/django_irods/download/bags/4ed71909c5f2408dad677a462119608a.zip,http://www.hydroshare.org/hsapi/resource/4ed71909c5f2408dad677a462119608a/scimeta/,Tian Gan,http://www.hydroshare.org/hsapi/resource/4ed71909c5f2408dad677a462119608a/map/,False,OPeNDAP (from Composite),True,True,False,11-13-2017,http://www.hydroshare.org/resource/4ed71909c5f2408dad677a462119608a/,True,ToolResource +[],5dbeb6164582414d9d0fac59266a036d,11-14-2017,http://www.hydroshare.org/django_irods/download/bags/5dbeb6164582414d9d0fac59266a036d.zip,http://www.hydroshare.org/hsapi/resource/5dbeb6164582414d9d0fac59266a036d/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/5dbeb6164582414d9d0fac59266a036d/map/,False,Model files for PyTOPKAPI simulation of SanMarcos500mtrial,True,True,False,11-14-2017,http://www.hydroshare.org/resource/5dbeb6164582414d9d0fac59266a036d/,True,GenericResource +[],bc78b27b6b9b43edbe649e0521edc0d7,11-15-2017,http://www.hydroshare.org/django_irods/download/bags/bc78b27b6b9b43edbe649e0521edc0d7.zip,http://www.hydroshare.org/hsapi/resource/bc78b27b6b9b43edbe649e0521edc0d7/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/bc78b27b6b9b43edbe649e0521edc0d7/map/,False,Model files for PyTOPKAPI simulation of SanMarcos500mtrial2,True,True,False,11-15-2017,http://www.hydroshare.org/resource/bc78b27b6b9b43edbe649e0521edc0d7/,True,GenericResource +[],1c6f23fb5d774922bfe77938a13a8858,11-16-2017,http://www.hydroshare.org/django_irods/download/bags/1c6f23fb5d774922bfe77938a13a8858.zip,http://www.hydroshare.org/hsapi/resource/1c6f23fb5d774922bfe77938a13a8858/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/1c6f23fb5d774922bfe77938a13a8858/map/,False,Model files for PyTOPKAPI simulation of SantaCruz500m,True,True,False,11-16-2017,http://www.hydroshare.org/resource/1c6f23fb5d774922bfe77938a13a8858/,True,GenericResource +[],36d405936edd4f3d83f92332cdfc15c4,11-16-2017,http://www.hydroshare.org/django_irods/download/bags/36d405936edd4f3d83f92332cdfc15c4.zip,http://www.hydroshare.org/hsapi/resource/36d405936edd4f3d83f92332cdfc15c4/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/36d405936edd4f3d83f92332cdfc15c4/map/,False,Input-files for TOPNET model for SantaCruz_tonet,True,True,False,11-16-2017,http://www.hydroshare.org/resource/36d405936edd4f3d83f92332cdfc15c4/,True,GenericResource +[],51d6f84fc256435d80d8372ab9acf604,11-16-2017,http://www.hydroshare.org/django_irods/download/bags/51d6f84fc256435d80d8372ab9acf604.zip,http://www.hydroshare.org/hsapi/resource/51d6f84fc256435d80d8372ab9acf604/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/51d6f84fc256435d80d8372ab9acf604/map/,False,This is terrain files prepared using HydroTops for SantaCruzdemo,True,True,False,11-16-2017,http://www.hydroshare.org/resource/51d6f84fc256435d80d8372ab9acf604/,True,GenericResource +"[{u'type': u'period', u'value': {u'start': u'2011-01-01', u'end': u'2012-01-01'}}, {u'type': u'box', u'value': {u'northlimit': 49.3983, u'projection': u'WGS 84 EPSG:4326', u'name': u'United States', u'units': u'Decimal degrees', u'southlimit': 28.4805, u'eastlimit': -65.8984, u'westlimit': -124.9609}}]",0e6c5fb604b044b6b6f3804f906753cc,11-16-2017,http://www.hydroshare.org/django_irods/download/bags/0e6c5fb604b044b6b6f3804f906753cc.zip,http://www.hydroshare.org/hsapi/resource/0e6c5fb604b044b6b6f3804f906753cc/scimeta/,topkapi app,http://www.hydroshare.org/hsapi/resource/0e6c5fb604b044b6b6f3804f906753cc/map/,False,HydroTOP,True,True,False,11-16-2017,http://www.hydroshare.org/resource/0e6c5fb604b044b6b6f3804f906753cc/,True,ModelProgramResource 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u'value': {u'northlimit': 38.3939, u'projection': u'WGS 84 EPSG:4326', u'name': u'Rapidan River Basin', u'units': u'Decimal degrees', u'southlimit': 38.2436, u'eastlimit': -78.2855, u'westlimit': -78.4997}}]",659afefc7f5843ee90731b9fdf053b45,11-16-2017,http://www.hydroshare.org/django_irods/download/bags/659afefc7f5843ee90731b9fdf053b45.zip,http://www.hydroshare.org/hsapi/resource/659afefc7f5843ee90731b9fdf053b45/scimeta/,Jeff Bennett,http://www.hydroshare.org/hsapi/resource/659afefc7f5843ee90731b9fdf053b45/map/,False,Rapidan River Basin - Calibrated to May 2017 Storm,True,True,False,11-16-2017,http://www.hydroshare.org/resource/659afefc7f5843ee90731b9fdf053b45/,True,ModelInstanceResource +"[{u'type': u'box', u'value': {u'northlimit': 38.4423, u'projection': u'WGS 84 EPSG:4326', u'units': u'Decimal degrees', u'southlimit': 38.2872, u'eastlimit': -78.2635, u'westlimit': 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BagmatiRiverterrainAnalysis,True,True,False,11-18-2017,http://www.hydroshare.org/resource/ebda23b9e6054f5d8e6dc1ddb1594d26/,True,GenericResource +[],485ec2d88ce8443a89ab6baea4dc7f18,11-23-2017,http://www.hydroshare.org/django_irods/download/bags/485ec2d88ce8443a89ab6baea4dc7f18.zip,http://www.hydroshare.org/hsapi/resource/485ec2d88ce8443a89ab6baea4dc7f18/scimeta/,Curtis Rae,http://www.hydroshare.org/hsapi/resource/485ec2d88ce8443a89ab6baea4dc7f18/map/,False,Hinkson Creek Watershed Model,True,True,False,11-20-2017,http://www.hydroshare.org/resource/485ec2d88ce8443a89ab6baea4dc7f18/,True,ModelProgramResource +"[{u'type': u'period', u'value': {u'start': u'2014-10-01', u'end': u'2016-09-30'}}, {u'type': u'point', u'value': {u'units': u'Decimal degrees', u'east': -81.72384, u'north': 34.60712, u'name': u'Calhoun CZO Research Area 1 (Union County, SC, USA)', u'projection': u'WGS 84 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Nicholakos,http://www.hydroshare.org/hsapi/resource/59d18930a55d4b06b96739e289c50c46/map/,False,"HEC-HMS Runoff Model of Rapidan River watershed near Ruckersville, VA",True,True,False,11-21-2017,http://www.hydroshare.org/resource/59d18930a55d4b06b96739e289c50c46/,True,ModelInstanceResource +"[{u'type': u'box', u'value': {u'northlimit': 38.5288, u'projection': u'WGS 84 EPSG:4326', u'name': u'Rapidan River Watershed', u'units': u'Decimal degrees', u'southlimit': 38.2856, u'eastlimit': -78.2625, u'westlimit': -78.5536}}]",b5d55f69457e460fbf881b56e1a5a7ca,11-21-2017,http://www.hydroshare.org/django_irods/download/bags/b5d55f69457e460fbf881b56e1a5a7ca.zip,http://www.hydroshare.org/hsapi/resource/b5d55f69457e460fbf881b56e1a5a7ca/scimeta/,Benjamin Bowes,http://www.hydroshare.org/hsapi/resource/b5d55f69457e460fbf881b56e1a5a7ca/map/,False,Rapidan River Watershed,True,True,False,11-21-2017,http://www.hydroshare.org/resource/b5d55f69457e460fbf881b56e1a5a7ca/,False,ModelInstanceResource 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Bowers,http://www.hydroshare.org/hsapi/resource/39be8409cacf452d86d6cbd4b3488975/map/,False,HEC-HMS Model for Watershed Feeding USGS 01665500,True,True,False,11-21-2017,http://www.hydroshare.org/resource/39be8409cacf452d86d6cbd4b3488975/,True,CompositeResource +"[{u'type': u'point', u'value': {u'units': u'Decimal degrees', u'east': -78.34028, u'north': 38.28056, u'projection': u'WGS 84 EPSG:4326', u'name': u'Ruckersville, VA'}}]",2e0821c5140b4e34a93486aec90fee7c,11-22-2017,http://www.hydroshare.org/django_irods/download/bags/2e0821c5140b4e34a93486aec90fee7c.zip,http://www.hydroshare.org/hsapi/resource/2e0821c5140b4e34a93486aec90fee7c/scimeta/,Faria Zahura,http://www.hydroshare.org/hsapi/resource/2e0821c5140b4e34a93486aec90fee7c/map/,True,HEC-HMS Modeling for Ruckersville Watershed,False,True,True,11-21-2017,http://www.hydroshare.org/resource/2e0821c5140b4e34a93486aec90fee7c/,True,ModelProgramResource +"[{u'type': u'box', u'value': {u'northlimit': 38.4208, u'projection': u'WGS 84 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+[],4ce9bbaec61c473f87d0503a71a0d143,12-19-2017,http://www.hydroshare.org/django_irods/download/bags/4ce9bbaec61c473f87d0503a71a0d143.zip,http://www.hydroshare.org/hsapi/resource/4ce9bbaec61c473f87d0503a71a0d143/scimeta/,Gmail Support,http://www.hydroshare.org/hsapi/resource/4ce9bbaec61c473f87d0503a71a0d143/map/,False,Add another Email Account in Your Gmail app,True,True,False,12-19-2017,http://www.hydroshare.org/resource/4ce9bbaec61c473f87d0503a71a0d143/,True,GenericResource +"[{u'type': u'box', u'value': {u'northlimit': 50.6347, u'projection': u'WGS 84 EPSG:4326', u'name': u'US domin', u'units': u'Decimal degrees', u'southlimit': 24.5122, u'eastlimit': -66.0187, u'westlimit': -124.9022}}]",b35ca323d5f74e36ae90e9d968f96e51,12-21-2017,http://www.hydroshare.org/django_irods/download/bags/b35ca323d5f74e36ae90e9d968f96e51.zip,http://www.hydroshare.org/hsapi/resource/b35ca323d5f74e36ae90e9d968f96e51/scimeta/,Emad Habib,http://www.hydroshare.org/hsapi/resource/b35ca323d5f74e36ae90e9d968f96e51/map/,False,Water Use and Supply Data,False,True,False,12-21-2017,http://www.hydroshare.org/resource/b35ca323d5f74e36ae90e9d968f96e51/,False,GeographicFeatureResource +[],cb02607d82634cd788d9016ec3720749,12-21-2017,http://www.hydroshare.org/django_irods/download/bags/cb02607d82634cd788d9016ec3720749.zip,http://www.hydroshare.org/hsapi/resource/cb02607d82634cd788d9016ec3720749/scimeta/,David Tarboton,http://www.hydroshare.org/hsapi/resource/cb02607d82634cd788d9016ec3720749/map/,False,"HydroShare 2017-2021 Proposal: Cyberinfrastructure for Advancing Hydrologic Knowledge through Collaborative Integration of Data Science, Modeling and Analysis",True,True,False,12-21-2017,http://www.hydroshare.org/resource/cb02607d82634cd788d9016ec3720749/,True,CompositeResource +[],12aa0fb6fb0c4185bcca27f94151037e,12-22-2017,http://www.hydroshare.org/django_irods/download/bags/12aa0fb6fb0c4185bcca27f94151037e.zip,http://www.hydroshare.org/hsapi/resource/12aa0fb6fb0c4185bcca27f94151037e/scimeta/,Christina Bandaragoda,http://www.hydroshare.org/hsapi/resource/12aa0fb6fb0c4185bcca27f94151037e/map/,False,"Skagit Observatory Bias Correction Results (Livneh et al., 2013 to WRF (Salathe et al., 2014) with low elevation spatial average correction",True,True,False,12-22-2017,http://www.hydroshare.org/resource/12aa0fb6fb0c4185bcca27f94151037e/,True,GenericResource diff --git a/src/WebSDL/settings/base.py b/src/WebSDL/settings/base.py index 9ee5fa54..8e071791 100644 --- a/src/WebSDL/settings/base.py +++ b/src/WebSDL/settings/base.py @@ -12,6 +12,11 @@ import os import json +import getpass +import logging + +# Set application logging level +logging.basicConfig(level=logging.INFO) # Build paths inside the project like this: os.path.join(BASE_DIR, ...) BASE_DIR = os.path.dirname(os.path.dirname(os.path.abspath(__file__))) @@ -76,7 +81,7 @@ TEMPLATES = [ { 'BACKEND': 'django.template.backends.django.DjangoTemplates', - 'DIRS': [os.path.join(BASE_DIR, 'templates')] + 'DIRS': [os.path.join(BASE_DIR, 'hydroshare')] , 'APP_DIRS': True, 'OPTIONS': { @@ -137,7 +142,7 @@ USE_L10N = True -LOGIN_URL = 'login' +LOGIN_URL = '/login/' DATABASE_ROUTERS = ['WebSDL.db_routers.WebSDLRouter'] @@ -168,7 +173,13 @@ EMAIL_HOST = EMAIL_SERVER[0] if isinstance(EMAIL_SERVER, tuple) else EMAIL_SERVER -DATETIME_FORMAT = "N j, Y, H:m" +DATETIME_FORMAT = "N j, Y g:i a" + +HYDROSHARE_UTIL_CONFIG = { + 'CLIENT_ID': data["hydroshare_oauth"]["client_id"], + 'CLIENT_SECRET': data["hydroshare_oauth"]["client_secret"], + 'REDIRECT_URI': data["hydroshare_oauth"]["redirect_uri"], +} INFLUX_URL_QUERY = data['influx_query'] @@ -180,3 +191,11 @@ SENSOR_DATA_PERIOD = data['sensor_data_period'] if 'sensor_data_period' in data else '2' TSA_URL = data['tsa_url'] if 'tsa_url' in data else '' + +# crontab job settings +CRONTAB_USER = data.get('crontab_user', getpass.getuser()) + +CRONTAB_LOGFILE_PATH = data.get('crontab_log_file', '/var/log/odm2websdl-cron.log') + +CRONTAB_EXECUTE_DAILY_AT_HOUR = 5 + diff --git a/src/WebSDL/settings/linux_sandbox.py b/src/WebSDL/settings/linux_sandbox.py new file mode 100644 index 00000000..a06e4c30 --- /dev/null +++ b/src/WebSDL/settings/linux_sandbox.py @@ -0,0 +1,16 @@ +from WebSDL.settings.base import * + +DEBUG = False + +ALLOWED_HOSTS = ['127.0.0.1', 'localhost'] +if "host" in data: + ALLOWED_HOSTS.append(data["host"]) +if "host_alt" in data: + ALLOWED_HOSTS.append(data["host_alt"]) +if "host_staging" in data: + ALLOWED_HOSTS.append(data["host_staging"]) + +STATIC_ROOT = data["static_root"] +SITE_ROOT = "/opt/websdlenvironment/" +STATIC_URL = '/static/' +SITE_URL = '' diff --git a/src/WebSDL/settings/macos_sandbox.py b/src/WebSDL/settings/macos_sandbox.py new file mode 100644 index 00000000..c96ca362 --- /dev/null +++ b/src/WebSDL/settings/macos_sandbox.py @@ -0,0 +1,48 @@ +from WebSDL.settings.base import * + +DEBUG = True + +ALLOWED_HOSTS = ['127.0.0.1', 'localhost'] +if "host" in data: + ALLOWED_HOSTS.append(data["host"]) +if "host_alt" in data: + ALLOWED_HOSTS.append(data["host_alt"]) +if "host_staging" in data: + ALLOWED_HOSTS.append(data["host_staging"]) + +STATIC_ROOT = data["static_root"] +SITE_ROOT = "/opt/websdlenvironment/" +STATIC_URL = '/static/' +SITE_URL = '' + +""" +Installing postgreSQL on MacOS +------------------------------ +1. Setting up Homebrew + 1a. If you don't have Homebrew installed, visit https://brew.sh/ for installation instructions + 1b. If Homebrew is already installed, run: + brew doctor + brew update + +2. Install postgres by running the following commands: + - brew update + - brew install postgres + - brew tap homebrew/services + +3. To start up postgres, run: + brew services start postgresql + +4. To stop postgres, run: + brew services stop postgresql + +5. To restart postgres, run: + brew services restart postgresql + +6. To create a new user: + createuser --interactive + +7. To connect to a database: + psql [-U ] + +""" + diff --git a/src/WebSDL/settings/settings_template.json b/src/WebSDL/settings/settings_template.json index b7dd6675..1379718e 100644 --- a/src/WebSDL/settings/settings_template.json +++ b/src/WebSDL/settings/settings_template.json @@ -31,7 +31,8 @@ "hydroshare_oauth": { "client_id": "client_id_here", "client_secret": "client_secret_here", - "redirect_uri": "http://localhost:8000/oauth/hydroshare/", - "response_type": "code" - } + "redirect_uri": "http://localhost:8000/hydroshare/oauth/" + }, + "crontab_log_file": "/var/log/crontab.log", + "crontab_user": "joesmokum" } diff --git a/src/WebSDL/settings/windows_sandbox.py b/src/WebSDL/settings/windows_sandbox.py new file mode 100644 index 00000000..9fdbe759 --- /dev/null +++ b/src/WebSDL/settings/windows_sandbox.py @@ -0,0 +1,17 @@ +from WebSDL.settings.base import * + +DEBUG = True + +ALLOWED_HOSTS = ['127.0.0.1', 'localhost'] + +if "host" in data: + ALLOWED_HOSTS.append(data["host"]) +if "host_alt" in data: + ALLOWED_HOSTS.append(data["host_alt"]) +if "host_staging" in data: + ALLOWED_HOSTS.append(data["host_staging"]) + +STATIC_ROOT = data["static_root"] +SITE_ROOT = "C:/Users/fryar/projects/ODM2WebSDL/" +STATIC_URL = '/static/' +SITE_URL = '' diff --git a/src/WebSDL/urls.py b/src/WebSDL/urls.py index 280895d5..c3f47413 100644 --- a/src/WebSDL/urls.py +++ b/src/WebSDL/urls.py @@ -52,5 +52,5 @@ url(r'^' + BASE_URL + 'account/$', UserUpdateView.as_view(), name='user_account'), url(r'^' + BASE_URL + 'api-auth/', include('rest_framework.urls', namespace='rest_framework')), url(BASE_URL, include('dataloaderinterface.urls')), - url(BASE_URL, include('dataloaderservices.urls')), + url(BASE_URL, include('dataloaderservices.urls')) ] diff --git a/src/WebSDL/wsgi.py b/src/WebSDL/wsgi.py index 93c3ed55..913bdbc4 100644 --- a/src/WebSDL/wsgi.py +++ b/src/WebSDL/wsgi.py @@ -8,9 +8,12 @@ """ import os +import crontab_jobs from django.core.wsgi import get_wsgi_application os.environ.setdefault("DJANGO_SETTINGS_MODULE", "WebSDL.settings") +crontab_jobs.start_jobs() + application = get_wsgi_application() diff --git a/src/crontab_jobs.py b/src/crontab_jobs.py new file mode 100644 index 00000000..21dc60f3 --- /dev/null +++ b/src/crontab_jobs.py @@ -0,0 +1,112 @@ +import os +import subprocess +import fnmatch +from crontab import CronTab +import re +from django.utils.termcolors import colorize + +from WebSDL.settings.base import CRONTAB_LOGFILE_PATH as LOGFILE +from WebSDL.settings.base import CRONTAB_EXECUTE_DAILY_AT_HOUR as AT_HOUR + +JOB_COMMENT_PREPENDER = "__odm2websdl__" + + +def start_jobs(user=True): + """ + Starts crontab jobs defined in this method. + + Currently the only cronjob in this file is the one to upload files to hydroshare.org on a scheduled basis... + + :param user: A {bool} or a {string} that represents an OS level user (i.e. 'root'). If user is a bool and equal to + True, crontab jobs are scheduled under the current OS user. + """ + # check if LOGFILE exists and create if not + if not os.path.exists(LOGFILE): + try: + open(LOGFILE, "a+").close() # open file for appending + except IOError: + pass # most likely will fail because of permission error + + # make sure user has write permissions to LOGFILE + if not os.access(LOGFILE, os.W_OK): + import getpass + + curr_user = getpass.getuser() + msg = "\nWARNING: user '{0}' does not have the write permission to {1}. crontab jobs might not run correctly"\ + .format(curr_user, LOGFILE) + print(colorize(msg, fg='red')) + + else: + + manage_path = locate_file('manage.py') # get the file path of 'manage.py' + if manage_path is None: + raise Exception('the file "manage.py" was not found') + + output = subprocess.check_output(['which', 'python']) # get the python path used by the current process + python_path = re.sub(r"(?<=[a-z])\r?\n", "", output) # remove newlines from output... + + cron = CronTab(user=user) # get cron object for managing crontab jobs + + # stop jobs to prevent job duplication + if len(cron): + stop_jobs(cron) + + """ + Create crontab job for scheduled hydroshare file uploads + Example of what the crontab job would look like from this command: + 0 */5 * * * python manage.py update_hydroshare_resource_files --settings=WebSDL.linux_sandbox >> \ + /crontab.log 2>> /crontab.log # __odm2websdl__upload_hydroshare_files + """ + command_name = 'update_hydroshare_resource_files' + job = cron.new(command="""{python} {manage} {command} --settings={settings} >> {logfile} 2>> {logfile}""".format( + python=python_path, + manage=manage_path, + command=command_name, + settings=os.environ['DJANGO_SETTINGS_MODULE'], + logfile=LOGFILE), + comment=JOB_COMMENT_PREPENDER + 'upload_hydroshare_files') + job.every().day() # run everyday + job.hour.on(AT_HOUR) # at the time specified by AT_HOUR + + cron.write() # write, i.e. 'save' crontab job + + """ + Add additional jobs below here if ever needed... + """ + + # print jobs created + print(colorize("\nStarted crontab jobs: ", fg='blue')) + for job in cron: + print(colorize('\t' + str(job), fg='green')) + + +def stop_jobs(cron=None, user=None): + """ Stops crontab jobs containing JOB_COMMENT_PREPENDER in the job's comment """ + print(colorize("\nStopping crontab jobs: ", fg='blue')) + if cron is None and user: + cron = CronTab(user=user) + + for job in cron: + if re.search(re.escape(JOB_COMMENT_PREPENDER), job.comment): + job_name = re.sub(re.escape(JOB_COMMENT_PREPENDER), r'', job.comment) + print("\t" + colorize(str(job_name), fg='green')) + cron.remove(job) + cron.write() + + +def locate_file(pattern, root=os.curdir): # types: (str, str) -> str + """ + locates a file and returns the absolute path + + :param pattern - a string representation of a file to locate. + :param root - the root directory to search in for the file. + :returns - a string representation of the absolute path of the file if found. Returns None if the file is not found. + """ + for path, dirs, files in os.walk(os.path.abspath(root)): + for filename in fnmatch.filter(files, pattern): + return os.path.join(path, filename) + return None + + +if __name__ == "__main__": + start_jobs() diff --git a/src/dataloader/migrations/0001_initial.py b/src/dataloader/migrations/0001_initial.py index bc508cac..75a8b5c2 100644 --- a/src/dataloader/migrations/0001_initial.py +++ b/src/dataloader/migrations/0001_initial.py @@ -1,5 +1,5 @@ # -*- coding: utf-8 -*- -# Generated by Django 1.10.3 on 2017-09-13 10:04 +# Generated by Django 1.10.3 on 2018-01-11 08:22 from __future__ import unicode_literals from django.db import migrations, models @@ -849,8 +849,8 @@ class Migration(migrations.Migration): name='RelatedAnnotation', fields=[ ('relation_id', models.AutoField(db_column='relationid', primary_key=True, serialize=False)), - ('annotation', models.ForeignKey(db_column='annotationid', on_delete=django.db.models.deletion.CASCADE, related_name='related_annonation__annotation', to='dataloader.Annotation')), - ('related_annotation', models.ForeignKey(db_column='relatedannotationid', on_delete=django.db.models.deletion.CASCADE, related_name='related_annotation__related_annontation', to='dataloader.Annotation')), + ('annotation', models.ForeignKey(db_column='annotationid', on_delete=django.db.models.deletion.CASCADE, related_name='related_annonation_annotation', to='dataloader.Annotation')), + ('related_annotation', models.ForeignKey(db_column='relatedannotationid', on_delete=django.db.models.deletion.CASCADE, related_name='related_annotation_related_annontation', to='dataloader.Annotation')), ], options={ 'db_table': 'relatedannotations', @@ -861,8 +861,8 @@ class Migration(migrations.Migration): fields=[ ('relation_id', models.AutoField(db_column='relationid', primary_key=True, serialize=False)), ('version_code', models.CharField(blank=True, db_column='versioncode', max_length=50)), - ('data_set', models.ForeignKey(db_column='datasetid', on_delete=django.db.models.deletion.CASCADE, related_name='related_dataset__dataset', to='dataloader.DataSet')), - ('related_data_set', models.ForeignKey(db_column='relateddatasetid', on_delete=django.db.models.deletion.CASCADE, related_name='related_dataset__related_dataset', to='dataloader.DataSet')), + ('data_set', models.ForeignKey(db_column='datasetid', on_delete=django.db.models.deletion.CASCADE, related_name='related_dataset_dataset', to='dataloader.DataSet')), + ('related_data_set', models.ForeignKey(db_column='relateddatasetid', on_delete=django.db.models.deletion.CASCADE, related_name='related_dataset_related_dataset', to='dataloader.DataSet')), ], options={ 'db_table': 'relateddatasets', @@ -896,8 +896,8 @@ class Migration(migrations.Migration): name='RelatedModel', fields=[ ('relation_id', models.AutoField(db_column='relationid', primary_key=True, serialize=False)), - ('model', models.ForeignKey(db_column='modelid', on_delete=django.db.models.deletion.CASCADE, related_name='related_model__model', to='dataloader.Model')), - ('related_model', models.ForeignKey(db_column='relatedmodelid', on_delete=django.db.models.deletion.CASCADE, related_name='related_model__related_model', to='dataloader.Model')), + ('model', models.ForeignKey(db_column='modelid', on_delete=django.db.models.deletion.CASCADE, related_name='related_model_model', to='dataloader.Model')), + ('related_model', models.ForeignKey(db_column='relatedmodelid', on_delete=django.db.models.deletion.CASCADE, related_name='related_model_related_model', to='dataloader.Model')), ], options={ 'db_table': 'relatedmodels', @@ -1117,6 +1117,7 @@ class Migration(migrations.Migration): ('source_vocabulary_uri', models.CharField(blank=True, db_column='sourcevocabularyuri', max_length=255)), ], options={ + 'ordering': ['name'], 'db_table': 'cv_sitetype', }, ), @@ -2028,7 +2029,7 @@ class Migration(migrations.Migration): migrations.AddField( model_name='relatedresult', name='related_result', - field=models.ForeignKey(db_column='relatedresultid', on_delete=django.db.models.deletion.CASCADE, related_name='related_result__related_result', to='dataloader.Result'), + field=models.ForeignKey(db_column='relatedresultid', on_delete=django.db.models.deletion.CASCADE, related_name='related_result_related_result', to='dataloader.Result'), ), migrations.AddField( model_name='relatedresult', @@ -2048,7 +2049,7 @@ class Migration(migrations.Migration): migrations.AddField( model_name='relatedfeature', name='related_feature', - field=models.ForeignKey(db_column='relatedfeatureid', on_delete=django.db.models.deletion.CASCADE, related_name='related_features__related_feature', to='dataloader.SamplingFeature'), + field=models.ForeignKey(db_column='relatedfeatureid', on_delete=django.db.models.deletion.CASCADE, related_name='related_features_related_feature', to='dataloader.SamplingFeature'), ), migrations.AddField( model_name='relatedfeature', @@ -2058,7 +2059,7 @@ class Migration(migrations.Migration): migrations.AddField( model_name='relatedfeature', name='sampling_feature', - field=models.ForeignKey(db_column='samplingfeatureid', on_delete=django.db.models.deletion.CASCADE, related_name='related_features__sampling_feature', to='dataloader.SamplingFeature'), + field=models.ForeignKey(db_column='samplingfeatureid', on_delete=django.db.models.deletion.CASCADE, related_name='related_features_sampling_feature', to='dataloader.SamplingFeature'), ), migrations.AddField( model_name='relatedfeature', diff --git a/src/dataloaderinterface/__init__.py b/src/dataloaderinterface/__init__.py index e69de29b..335e23da 100644 --- a/src/dataloaderinterface/__init__.py +++ b/src/dataloaderinterface/__init__.py @@ -0,0 +1,15 @@ +import sys +import signal +import crontab_jobs + +default_app_config = 'dataloaderinterface.apps.DataloaderinterfaceConfig' + + +def on_dataloaderinterface_shutdown(*args): + from django.conf import settings + crontab_jobs.stop_jobs(user=settings.CRONTAB_USER) + sys.exit(0) + + +signal.signal(signal.SIGINT, on_dataloaderinterface_shutdown) +signal.signal(signal.SIGTERM, on_dataloaderinterface_shutdown) diff --git a/src/dataloaderinterface/admin.py b/src/dataloaderinterface/admin.py index 4f8b4d3c..64425d80 100644 --- a/src/dataloaderinterface/admin.py +++ b/src/dataloaderinterface/admin.py @@ -4,7 +4,7 @@ # Register your models here. -from dataloaderinterface.models import SiteRegistration, SiteSensor +from dataloaderinterface.models import SiteRegistration, SiteSensor, HydroShareResource, HydroShareAccount, ODM2User def update_sensor_data(obj, form, sensor_fields): @@ -65,3 +65,29 @@ def save_model(self, request, obj, form, change): @admin.register(InstrumentOutputVariable) class InstrumentOutputVariableAdmin(admin.ModelAdmin): pass + + +class ODM2UserInline(admin.TabularInline): + model = ODM2User + fields = ('id', 'user', 'hydroshare_account') + readonly_fields = ('id', 'user') + + +class HydroShareResourceInline(admin.TabularInline): + model = HydroShareResource + + +@admin.register(ODM2User) +class ODM2UserAdmin(admin.ModelAdmin): + pass + + +@admin.register(HydroShareAccount) +class HydroShareAccountAdmin(admin.ModelAdmin): + list_display = ('id', 'ext_id', 'username', 'resources') + fields = ('ext_id', 'token') + + +@admin.register(HydroShareResource) +class HydroShareResourceAdmin(admin.ModelAdmin): + pass diff --git a/src/dataloaderinterface/forms.py b/src/dataloaderinterface/forms.py index faefb343..4febfb55 100644 --- a/src/dataloaderinterface/forms.py +++ b/src/dataloaderinterface/forms.py @@ -1,7 +1,6 @@ -from datetime import datetime - +# -*- coding: utf-8 -*- +from datetime import datetime, timedelta from django.forms import NumberInput, TimeInput - from dataloader.models import SamplingFeature, People, Organization, Affiliation, Result, Site, EquipmentModel, Medium, \ OrganizationType, ActionBy, SiteType from django import forms @@ -9,8 +8,10 @@ from django.contrib.auth.models import User from django.db.models.query_utils import Q from django.forms.formsets import formset_factory +from django.utils.safestring import mark_safe +import re -from dataloaderinterface.models import ODM2User, SiteAlert +from dataloaderinterface.models import ODM2User, HydroShareResource, SiteRegistration, SiteAlert class SiteTypeSelect(forms.Select): @@ -20,7 +21,95 @@ def create_option(self, name, value, label, selected, index, subindex=None, attr return option -# AUTHORIZATION +class MDLRadioButton(forms.RadioSelect): + def render(self, name, value, attrs=None, renderer=None): + """Adds MDL HTML classes to label and input tags""" + html = super(MDLRadioButton, self).render(name, value, attrs=attrs, renderer=renderer) + html = re.sub(r'', '', html) + html = re.sub(r'(