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Enable visualising of SWC files in OSB Explorer e.g. for NeuroMorpho #91

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pgleeson opened this issue Apr 1, 2014 · 3 comments
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@pgleeson
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pgleeson commented Apr 1, 2014

Steps required:

Update https://github.com/pgleeson/Cvapp-NeuroMorpho.org to ensure conversion of SWC to latest NeuroML2 morphologies

Convert project to use Maven

Bundle with jNeuroML & add -import-swc option

Update org.neuroml.visualiser to accept urls like http://neuromorpho.org/neuroMorpho/dableFiles/jacobs/CNG%20version/146-2-4.CNG.swc & automatically detect that it's SWC, convert to nml2 & visualise

Ask NeuroMorpho.org to add links like:
View this morphology on Open Source Brain

@pgleeson
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This could be enabled by an SWC import function in org.neuroml.import. See issue here: NeuroML/org.neuroml.export#21

@adrianq adrianq added the ideas label Aug 3, 2015
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adrianq commented Sep 16, 2015

@tarelli & friends are working on an interpreter for swc. I think this is a better approach. Once this is done we can add swc files to the 'OSB 3D Explorer' menu we have in OSB.

I will keep an eye on this and once ready I will integrate the interpreter into OSB 3D Explorer

@adrianq adrianq self-assigned this Sep 16, 2015
@adrianq adrianq added ideas and removed ideas labels Sep 16, 2015
@pgleeson
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We can put some SWC into https://github.com/OpenSourceBrain/NeuroMorpho to illustrate loading of SWC directly from OSB

@adrianq adrianq added ready and removed ideas labels Feb 11, 2016
@adrianq adrianq added this to the Release 21 milestone Feb 16, 2016
@adrianq adrianq added in progress and removed ready labels Feb 17, 2016
@adrianq adrianq closed this as completed Feb 17, 2016
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