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*** buffer overflow detected ***: psipred terminated xx/1.0.0.2/RoseTTAFold/input_prep/make_ss.sh: line 19: 1324074 Aborted (core dumped) psipred $ID.mtx $DATADIR/weights.dat $DATADIR/weights.dat2 $DATADIR/weights.dat3 > $ID.ss Bad psipred pass1 file format! rm: cannot remove 'xxProteinFolding/RoseTTAFold/test/t000_.msa0.a3m.csb.hhblits.ss2': No such file or directory
The text was updated successfully, but these errors were encountered:
Fixed by making the following linbe to RoseTTAFold/input_prep
export BLASTMAT=/share/blast-2.2.26/data
#!/bin/bash
export BLASTMAT=/cluster/software/RoseTTAFold/1.0.0.2/share/blast-2.2.26/data DATADIR="$CONDA_PREFIX/share/psipred_4.01/data" echo $DATADIR
i_a3m="$1" o_ss="$2"
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This fix also solved #2
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*** buffer overflow detected ***: psipred terminated
xx/1.0.0.2/RoseTTAFold/input_prep/make_ss.sh: line 19: 1324074 Aborted (core dumped) psipred $ID.mtx $DATADIR/weights.dat $DATADIR/weights.dat2 $DATADIR/weights.dat3 > $ID.ss
Bad psipred pass1 file format!
rm: cannot remove 'xxProteinFolding/RoseTTAFold/test/t000_.msa0.a3m.csb.hhblits.ss2': No such file or directory
The text was updated successfully, but these errors were encountered: