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test.sh
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test.sh
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#!/usr/bin/env bash
SCRIPTPATH="$( cd "$(dirname "$0")" ; pwd -P )"
bash build.sh
VOLUME_SUFFIX=$(dd if=/dev/urandom bs=32 count=1 | md5sum | cut --delimiter=' ' --fields=1)
MEM_LIMIT="30g" # Maximum is currently 30g, configurable in your algorithm image settings on grand challenge
docker volume create surgtoolloc_det-output-$VOLUME_SUFFIX
# Do not change any of the parameters to docker run, these are fixed
docker run --rm \
--memory="${MEM_LIMIT}" \
--memory-swap="${MEM_LIMIT}" \
--network="none" \
--cap-drop="ALL" \
--security-opt="no-new-privileges" \
--shm-size="4g" \
--pids-limit="256" \
-v $SCRIPTPATH/test/:/input/ \
-v surgtoolloc_det-output-$VOLUME_SUFFIX:/output/ \
surgtoolloc_det
docker run --rm \
-v surgtoolloc_det-output-$VOLUME_SUFFIX:/output/ \
python cat /output/results.json | python -m json.tool
python:3.9-slim cat /output/results.json | python -m json.tool
docker run --rm \
-v surgtoolloc_det-output-$VOLUME_SUFFIX:/output/ \
-v $SCRIPTPATH/test/:/input/ \
-v $SCRIPTPATH/:/tmp/ \
python:3.9-slim python -c "import json, sys; f1 = json.load(open('/output/surgical-tools.json')); f2 = json.load(open('/tmp/expected_output_detection.json')); sys.exit(f1 != f2);"
if [ $? -eq 0 ]; then
echo "Tests successfully passed..."
else
echo "Expected output was not found..."
fi
docker volume rm surgtoolloc_det-output-$VOLUME_SUFFIX