This is an overview of the markdown contents of all the notebooks / scripts in this directory. 00_intro_fig1_fig2 plot curves (for intro fig) plot curves (for examples fig) extract and plot videos make grid version of figs¶ grid of curves viz hists dset sizes compare outcome defns 00_tab1_data_summary prepare data look at different dsets summarize dsets 01_fit_dnn_best 01_fit_dnn_vary_hyperparams 01_fit_vary_train_size 01_process_train_size_results 02_fig3_all_models_cell_acc compare all different models across dsets 02_fig3_vary_train_size compare all different models across dsets plot accs of models trained on subsamples data 02_fit_all_models_and_eval_dnn 03_fig3_cum_acc_lifetime_acc prepare data errs in different regions acc for different lifetimes cumulative acc across everything 03_fig3_data_downsampling_accs prepare data lower res data (downsample) look at the downsample acc for the original data 04_fig4_pred_scatter_plots prepare data scatter plots colored scatter plot (deprecated) 05_fig5_interpret_errs prepare data viz errs figure version kymographs 06_fig6_interpret_interactions prepare data segmentation make simple illustrative plot recalculate with normalized scores (there is some err here) interpret one pred at multiple scales