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packages.xml
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packages.xml
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<packages>
<!--names in alphabetic order-->
<package name='BDSKY' version='1.1.0'
url="http://bdssm-beast2.googlecode.com/files/BDSKY.addon.v1.1.0.zip"
description="birth death skyline -- handles serially sampled tips">
<depends on='beast2' atleast='2.1.0'/>
</package>
<package name='BEASTii' version='1.1.0'
url="http://beastii.googlecode.com/files/BEASTii.addon.v1.1.0.zip"
description="BEAST utilities, such as multi threaded treeliklihood">
<depends on='beast2' atleast='2.1.0'/>
</package>
<package name='BEAST_CLASSIC' version='1.1.2'
url="https://www.cs.auckland.ac.nz/~remco/BEASTBook/BEAST_CLASSIC.addon.v1.1.2.zip"
description="BEAST classes ported from BEAST 1 in wrappers" >
<depends on='beast2' atleast='2.1.0'/>
<depends on='BEASTii' atleast='1.1.0'/>
</package>
<package name='CA' version='1.0.0'
url="http://beastii.googlecode.com/files/CA.addon.v1.0.0.zip"
description="CladeAge package for fossil calibrations">
<depends on='beast2' atleast='2.1.0'/>
</package>
<package name='DISSECT' version='1.0.0'
url="http://www.indriid.com/2014/DISSECT.addon.v1.0.0.zip"
description="species delimitation with *BEAST">
<depends on='beast2' atleast='2.1.0'/>
</package>
<package name='phylodynamics' version='1.0.0'
url="http://bdssm-beast2.googlecode.com/files/phylodynamics.addon.zip"
description="birth death skyline model" >
<depends on='beast2' atleast='2.1.0'/>
</package>
<package name='MASTER' version='1.4.1'
url="https://github.com/CompEvol/MASTER/releases/download/v1.4.1/MASTER.addon.v1.4.1.zip"
description="stochastic simulation" >
<depends on='beast2' atleast='2.1.0'/>
</package>
<package name='RBS' version='1.1.0'
url="http://rb-beast.googlecode.com/files/RBS.addon.v1.1.0.zip"
description="Reversible-jump Based substitution model" >
<depends on='beast2' atleast='2.1.0'/>
</package>
<package name='SA' version='1.0.0'
url="http://beastii.googlecode.com/files/SA.addon.v1.0.0.zip"
description="Sampled ancestor trees" >
<depends on='beast2' atleast='2.1.0'/>
</package>
<package name='SNAPP' version='1.1.4'
url="https://www.cs.auckland.ac.nz/~remco/BEASTBook/SNAPP.addon.v1.1.4.zip"
description="SNP and AFLP Phylogenies" >
<depends on='beast2' atleast='2.1.0'/>
</package>
<package name='SubstBMA' version='1.1.0'
url="http://www.cs.auckland.ac.nz/~remco/BEASTBook/SubstBMA.addon.v1.1.0.zip"
description="Substitution Bayesian Model Averaging" >
<depends on='beast2' atleast='2.1.0'/>
</package>
</packages>