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vcf2json

Python script that converts an standard VCF to JSON format. It handles VEP style format annotation

Requirements

  • Python 3.4+

Usage

python3 vcf2json.py --input_vcf vcf

JSON output name keeps the prefix from the VCF. For further details see the help command.

python3 vcf2json.py  -h

License

GNU GPLv3