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merge hmc-clock into BigFastTreeModel BEAST CI #932: Commit 7e2a7ed pushed by xji3
October 31, 2023 17:33 16m 22s BigFastTreeModel
BigFastTreeModel
October 31, 2023 17:33 16m 22s
add gmrf model,parser,test BEAST CI #931: Commit 67f3782 pushed by PratyusaDatta
October 30, 2023 21:17 11m 16s hmc-clock
hmc-clock
October 30, 2023 21:17 11m 16s
refactor popSizeParameter to data for GmrfLikelihood, time-aware stil… BEAST CI #930: Commit 7a6a9bd pushed by xji3
October 30, 2023 17:43 11m 21s hmc-clock
hmc-clock
October 30, 2023 17:43 11m 21s
add parser, still need to check numbers BEAST CI #929: Commit 72af827 pushed by xji3
October 27, 2023 23:50 11m 35s hmc-clock
hmc-clock
October 27, 2023 23:50 11m 35s
intermediate work on decoupling GMRF distribution BEAST CI #928: Commit e6551ca pushed by xji3
October 27, 2023 02:35 11m 34s hmc-clock
hmc-clock
October 27, 2023 02:35 11m 34s
let there be a parser for SkyGlideLikelihood BEAST CI #927: Commit f6d5b63 pushed by xji3
October 18, 2023 21:40 11m 24s hmc-clock
hmc-clock
October 18, 2023 21:40 11m 24s
a few more edits on SkyGlideLikelihood BEAST CI #926: Commit 29d896f pushed by xji3
October 18, 2023 20:54 13m 50s hmc-clock
hmc-clock
October 18, 2023 20:54 13m 50s
intermediate work for SkyGlideLikelihood BEAST CI #925: Commit ebdb530 pushed by xji3
October 17, 2023 21:20 11m 24s hmc-clock
hmc-clock
October 17, 2023 21:20 11m 24s
store useAmbiguities in PreOrderSettings for later getTipStates/Parti… BEAST CI #924: Commit b94a3ee pushed by xji3
October 17, 2023 18:24 13m 17s hmc-clock
hmc-clock
October 17, 2023 18:24 13m 17s
Merge branch 'master' into trait_beauti BEAST CI #923: Commit bd6bf6d pushed by gabehassler
October 12, 2023 15:20 5m 23s master
master
October 12, 2023 15:20 5m 23s
Merge branch 'master' into trait_beauti BEAST CI #922: Commit bd6bf6d pushed by gabehassler
October 12, 2023 15:11 5m 59s trait_beauti
trait_beauti
October 12, 2023 15:11 5m 59s
fixing error when taxa xml object isn't assigned id attribute BEAST CI #921: Commit 570dd96 pushed by gabehassler
October 12, 2023 15:10 6m 31s master
master
October 12, 2023 15:10 6m 31s
code cleaning BEAST CI #920: Commit 18ff405 pushed by gabehassler
October 11, 2023 23:52 4m 2s trait_beauti
trait_beauti
October 11, 2023 23:52 4m 2s
give example of file format when importing traits throws error BEAST CI #919: Commit 96d7d2a pushed by gabehassler
October 11, 2023 23:50 4m 1s trait_beauti
trait_beauti
October 11, 2023 23:50 4m 1s
bug fix when trait name not initially specified BEAST CI #918: Commit 05840a2 pushed by gabehassler
October 11, 2023 22:06 4m 12s trait_beauti
trait_beauti
October 11, 2023 22:06 4m 12s
use old node height gradient until the new one is ready BEAST CI #917: Commit a947474 pushed by xji3
October 11, 2023 17:17 11m 43s hmc-clock
hmc-clock
October 11, 2023 17:17 11m 43s
need to handle tipStates BEAST CI #916: Commit 407ea4f pushed by xji3
October 11, 2023 02:10 6h 0m 25s hmc-clock
hmc-clock
October 11, 2023 02:10 6h 0m 25s
happy travis CI BEAST CI #915: Commit 5b28353 pushed by xji3
October 10, 2023 15:25 6h 0m 27s hmc-clock
hmc-clock
October 10, 2023 15:25 6h 0m 27s
intermediate commit, a few more lines on preparing tri-diagonal entri… BEAST CI #914: Commit 9d2ce22 pushed by xji3
October 10, 2023 01:12 4m 31s hmc-clock
hmc-clock
October 10, 2023 01:12 4m 31s
a delegate to handle node height gradient and hessian BEAST CI #913: Commit 262d2ce pushed by xji3
October 9, 2023 01:41 11m 54s hmc-clock
hmc-clock
October 9, 2023 01:41 11m 54s
refactor affine correction BEAST CI #912: Commit 390bdd8 pushed by msuchard
October 8, 2023 15:15 14m 51s hmc-clock
hmc-clock
October 8, 2023 15:15 14m 51s
cache some affine correction calculations BEAST CI #911: Commit c8e443b pushed by msuchard
October 8, 2023 12:14 13m 11s hmc-clock
hmc-clock
October 8, 2023 12:14 13m 11s
clean code BEAST CI #910: Commit 52331dc pushed by msuchard
October 7, 2023 12:22 11m 34s hmc-clock
hmc-clock
October 7, 2023 12:22 11m 34s
all gradient approaches now implemented BEAST CI #909: Commit 8e07963 pushed by msuchard
October 6, 2023 22:57 11m 53s hmc-clock
hmc-clock
October 6, 2023 22:57 11m 53s
first working code of affine-correction using cross-products BEAST CI #908: Commit 142c699 pushed by msuchard
October 6, 2023 00:18 11m 15s hmc-clock
hmc-clock
October 6, 2023 00:18 11m 15s
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