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Generate list of synonyms for each FlyBase FBte ID #14

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cbergman opened this issue Jun 16, 2013 · 1 comment
Open

Generate list of synonyms for each FlyBase FBte ID #14

cbergman opened this issue Jun 16, 2013 · 1 comment

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@cbergman
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  • Use FBte IDs from list generated in issue Generate list of FBte ids in flybase #13
  • Note: there are Symbol Synonyms and Name Synonyms
  • Note: there are redundant synonyms for both symbols and names, duplicated across references
  • Need to mae non-redundant set of synonyms for both symbols and names
  • Note: there may be synonyms that are present in both nonredundant sets, so need to de-dup again on both files
  • Note: Github markdown interferes with backticks in for loop, need to cut and paste from raw comment text
@cbergman
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  • Scripts to generate symbol synonyms is: flybase_queries/get_flybase_fbte_symbol_synonyms.sh
  • Scripts to generate name synonyms is: flybase_queries/get_flybase_fbte_name_synonyms.sh

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@cbergman