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with phylophlan-3.0.3 when running phylophlan_setup_database -g s__Escherichia_coli -o ${PHYLOPHLAN_IDX_DIR}/s__Escherichia_coli
I have a bunch of [e] unable to download error message, see 20 first ones:
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_A0A377E404.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_Q0SXB2.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_B7LF13.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_Q83M63.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_B7UJQ9.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_Q32JE0.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_A8AQD5.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_A0A210FZQ3.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_B7MFJ5.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_B7NVU2.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_Q1R8H7.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_A7ZHG3.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_B5QTU8.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_B1LKD0.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_A0A376IVE3.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_A7ZV72.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_Q32E98.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_B5FNE0.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_P0ACJ2.fasta"
[e] unable to download "http://www.uniprot.org/uniref/UniRef90_P58696.fasta"
my guess is that taxa2core_cpa* files requires some update
regards
Eric
The text was updated successfully, but these errors were encountered:
Hello,
with phylophlan-3.0.3 when running
phylophlan_setup_database -g s__Escherichia_coli -o ${PHYLOPHLAN_IDX_DIR}/s__Escherichia_coli
I have a bunch of
[e] unable to download
error message, see 20 first ones:my guess is that taxa2core_cpa* files requires some update
regards
Eric
The text was updated successfully, but these errors were encountered: