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SNPs of locuscomparer are not the same as colocalization SNPs #24

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ghost opened this issue Jun 24, 2023 · 3 comments
Open

SNPs of locuscomparer are not the same as colocalization SNPs #24

ghost opened this issue Jun 24, 2023 · 3 comments

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@ghost
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ghost commented Jun 24, 2023

Hi,
I am using locuscomparer to visualize colocalization results, but the SNPs I draw with the R package are not the same as the colocalized SNPs. Could you help me with this? Thank you!
@NancyLSH
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Hi,
I am with the same problem, are you solve with it?

@guohuangda
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I have the same problem, the colocalized SNP (using 'coloc' package) was different from the plot one. Could u help me with this?

@guohuangda
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Hi, I am with the same problem, are you solve with it?
I have the same problem, the colocalized SNP (using 'coloc' package) was different from the plot one. Could u help me with this?

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@NancyLSH @guohuangda