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Completeness of TF Bind 8 Data in Design-bench #22
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Hi, TFBind8's subvariant by default is Data I uploaded to my Google Drive in the past were various segments of the entire
Does this answer your question?
Thanks, |
Hi Chris, Thanks a lot for your detailed answer! I believe you answered my question very well! I have confirmed the data here for TF SIX6_REF_R1 is mainly what I need. As you suggested, I have also found around 200 .npy files for binding affinities of other TFs in Brandon's upload. One quick follow-up question,
Thanks a lot for your help! |
According to the Design-bench paper, the TF Bind 8 dataset by default includes binding affinity data for TF SIX6_REF_R1. I understand that the Design-bench dataset is currently undergoing migration. In the interim, I accessed a folder named tf_bind_8-SIX6_REF_R1 within the design_bench_data_incomplete.zip file from the Google Drive link shared by the repository maintainer. Could you confirm whether this folder contains the complete TF Bind 8 dataset as referenced in the Design-bench paper?
Thank you for your assistance!
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