run_tests_octave.yml

---
name: tests and coverage with octave

env:
  OCTFLAGS: --no-gui --no-window-system --silent

concurrency:
  group: ${{ github.workflow }}-${{ github.ref }}
  cancel-in-progress: true

on:
  push:
    branches:
    - main
  pull_request:
    branches: ['*']
  schedule:
  - cron: 0 0 1 * *

  # Allows you to run this workflow manually from the Actions tab
  workflow_dispatch:

jobs:
  tests_octave:
    runs-on: ubuntu-latest

    steps:
    - name: Install CPP_ROI
      uses: actions/checkout@v4
      with:
        submodules: true
        fetch-depth: 0

    - name: Install SPM
      run: |
        git clone https://github.com/spm/spm12.git --depth 1

    - name: Install Moxunit and MOcov
      run: |
        git clone https://github.com/MOxUnit/MOxUnit.git --depth 1
        git clone https://github.com/MOcov/MOcov.git --depth 1

    - name: Install octave
      run: |
        sudo apt-get -y -qq update
        sudo apt-get -y install \
          octave \
          liboctave-dev\
          octave-common \
          octave-io \
          octave-image \
          octave-signal \
          octave-statistics
        make -C MOxUnit install
        make -C MOcov install

    - name: Compile SPM
      run: |
        make -C spm12/src PLATFORM=octave distclean
        make -C spm12/src PLATFORM=octave
        make -C spm12/src PLATFORM=octave install
        octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'spm12')); savepath();"

    - name: Add bids-matlab
      run: make install_dev

    - name: Run tests
      run: |
        octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'tests', 'utils')); savepath();"
        octave $OCTFLAGS --eval "cd(fullfile(getenv('GITHUB_WORKSPACE'), '.github', 'workflows')); run tests_octave;"

    - name: Code coverage
      uses: codecov/codecov-action@v4
      with:
        file: coverage.xml
        flags: octave
        name: codecov-umbrella
        fail_ci_if_error: false