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DESCRIPTION
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DESCRIPTION
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Package: CDMConnector
Title: Connect to an OMOP Common Data Model
Version: 1.6.0
Authors@R: c(
person("Adam", "Black", , "black@ohdsi.org", role = c("aut", "cre"),
comment = c(ORCID = "0000-0001-5576-8701")),
person("Artem", "Gorbachev", , "artem.gorbachev@odysseusinc.com", role = "aut"),
person("Edward", "Burn", , "edward.burn@ndorms.ox.ac.uk", role = "aut"),
person("Marti", "Catala Sabate", , "marti.catalasabate@ndorms.ox.ac.uk", role = "aut")
)
Description: Provides tools for working with observational health data in the
Observational Medical Outcomes Partnership (OMOP) Common Data Model format with a pipe friendly syntax.
Common data model database table references are stored in a single compound object along with metadata.
License: Apache License (>= 2)
URL: https://darwin-eu.github.io/CDMConnector/, https://github.com/darwin-eu/CDMConnector
BugReports: https://github.com/darwin-eu/CDMConnector/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends:
R (>= 4.0)
Imports:
dplyr,
dbplyr (>= 2.5.0),
DBI (>= 0.3.0),
checkmate,
cli,
purrr,
rlang,
tidyselect,
readr,
glue,
waldo,
methods,
withr,
lifecycle,
jsonlite,
stringr,
stringi,
fs,
generics,
tidyr,
omopgenerics (>= 0.1.2)
Suggests:
SqlRender,
CirceR,
rJava,
covr,
knitr,
rmarkdown,
duckdb,
RSQLite,
RPostgres,
DatabaseConnector,
odbc,
ggplot2,
bigrquery,
lubridate,
clock,
tibble,
testthat (>= 3.0.0),
pool,
snakecase,
palmerpenguins,
tictoc
Enhances:
arrow
Config/testthat/edition: 3
Config/testthat/parallel: false
VignetteBuilder: knitr
Collate:
'CDMConnector-package.R'
'Eunomia.R'
'benchmarkCDMConnector.R'
'cdm.R'
'cdmSubset.R'
'cdm_from_environment.R'
'cohortTransformations.R'
'cohort_ddl.R'
'compute.R'
'copy_cdm_to.R'
'dateadd.R'
'dbSource.R'
'reexports-omopgenerics.R'
'generateCohortSet.R'
'generateConceptCohortSet.R'
'summariseQuantile.R'
'utils.R'
'validate.R'
'zzz-deprecated.R'