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1. PathMatFac.jl PathMatFac.jl Public

   A matrix factorization model for multi-omic data and biological pathways

   Julia

2. MatFac.jl MatFac.jl Public

   A general-purpose, extensible Julia package for GPU-accelerated matrix factorization

   Julia 1

3. tcga-pipeline tcga-pipeline Public

   Downloads TCGA data and puts it into a nice HDF file

   Python

4. gitter-lab/ssps gitter-lab/ssps Public

   Sparse Signaling Pathway Sampling: MCMC for signaling pathway inference

   Julia 14

5. TrialMDP TrialMDP Public

   An algorithm that designs blocked Response-Adaptive Randomized (RAR) clinical trials

   C++

6. yahtzee yahtzee Public

   A Yahtzee-solving python package and command line tool

   Python 2 4