Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Stereo flags are displayed despite enabling 'Ignore chiral flag' in MOL V2000 files #6161

Open
Zhirnoff opened this issue Dec 16, 2024 · 1 comment
Open

Stereo flags are displayed despite enabling 'Ignore chiral flag' in MOL V2000 files #6161

Zhirnoff opened this issue Dec 16, 2024 · 1 comment
Assignees
@rrodionov91
Labels
bug Priority: High Severity: High High level visibility to the user Stereochemistry User's Feedback
Milestone
Ketcher 2.28.0-rc.4

Comments

@Zhirnoff
Copy link
Collaborator

Zhirnoff commented Dec 16, 2024 •
edited
Loading

Steps to Reproduce

  1. Go to the application settings and enable the "Ignore the chiral flag" option.
  2. Load file non-proprietary-structure.zip

Actual behavior
Despite "Ignore chiral flag" being enabled, the structure displays &1 annotations for stereocenters on the canvas.
2024-12-16_16h55_12

Expected behavior
The stereocenters (e.g., represented by &1) should not be displayed when "Ignore chiral flag" is enabled.
2024-12-16_16h56_22

Desktop:

  • OS: Windows 11
  • Browser Chrome
  • Version 128.0.6613.120 (Official Build) (64-bit)

Ketcher version
[Version 2.28.0-rc.3]
Indigo version
[Version 1.27.0-rc.1]

Related ticket: #2161

#188701608
@Zhirnoff Zhirnoff added this to the Ketcher 2.28.0-rc.4 milestone Dec 16, 2024
@Zhirnoff Zhirnoff changed the title Incorrect display of chiral centers (&1) when "Ignore chiral flag" is enabled in MOL V2000 format Stereo flags are displayed despite enabling 'Ignore chiral flag' in MOL V2000 files Dec 16, 2024
@AlexeyGirin
Copy link
Collaborator

Seems that Ketcher mol loader doesn't take into account that flag unlike Indigo mol loader

@rrodionov91 rrodionov91 self-assigned this Dec 17, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@rrodionov91 rrodionov91

Labels
bug Priority: High Severity: High High level visibility to the user Stereochemistry User's Feedback
Projects
None yet
Milestone
Ketcher 2.28.0-rc.4
Development

No branches or pull requests
3 participants
@rrodionov91 @AlexeyGirin @Zhirnoff