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bedUtils

Some utilities for working with BED files.

  • bedGraphSplitter.py: split data file into multiple files by column
  • bedMaker.py: create BED file from tab-delimited data file
  • bedMaker_unexplained.py: create BED file from "unexplained" data

There is also a Python module used by the bedMaker programs:

  • bedMakerUtils.py: utilities for creating BED files from tabbed data inputs

Set up and prerequisites

Requires the TabFile.py module from the FLS Bioinformatics Core genomics repository.