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ccc pvalue: add notebook to compute pvalues using gene pairs
tests #561: Commit 702fc19 pushed by miltondp
September 8, 2023 17:52 5m 20s revision
September 8, 2023 17:52 5m 20s
September 8, 2023 17:27 6m 9s
test_coef_pval: disable speed tests on GitHub Actions
tests #559: Commit 46e6551 pushed by miltondp
September 8, 2023 17:26 5m 22s revision
September 8, 2023 17:26 5m 22s
September 8, 2023 16:04 5m 8s
September 8, 2023 05:11 5m 19s
ccc profiling: run existing notebooks
tests #556: Commit ddb2f5f pushed by miltondp
September 7, 2023 20:36 5m 43s code-revision
September 7, 2023 20:36 5m 43s
10_compute_correlations: run all methods again
tests #555: Commit 82ca06b pushed by miltondp
September 7, 2023 19:13 6m 50s code-revision
September 7, 2023 19:13 6m 50s
corr: ccc uses use_ari_numba=True by default
tests #554: Commit dc17ff9 pushed by miltondp
September 7, 2023 02:50 5m 14s code-revision
September 7, 2023 02:50 5m 14s
ccc: remove obsolete argument
tests #553: Commit 32890b0 pushed by miltondp
September 7, 2023 02:46 6m 26s code-revision
September 7, 2023 02:46 6m 26s
05_preprocessing: run
tests #552: Commit 6d94d3e pushed by miltondp
September 7, 2023 02:44 7m 21s code-revision
September 7, 2023 02:44 7m 21s
10_compute_correlations: remove jupytext version info
tests #551: Commit ba75baa pushed by miltondp
September 6, 2023 21:36 7m 23s code-revision
September 6, 2023 21:36 7m 23s
disable speed tests on GitHub Actions
tests #550: Commit 4d4f70a pushed by miltondp
September 6, 2023 20:00 6m 4s code-revision
September 6, 2023 20:00 6m 4s
ccc pvalue: run notebook to generate null distribution
tests #549: Commit 630db23 pushed by miltondp
September 6, 2023 19:46 8m 2s code-revision
September 6, 2023 19:46 8m 2s
ccc: remove get_chunks function and simplify parallelization
tests #548: Commit 4555e9d pushed by miltondp
September 6, 2023 17:55 11m 29s code-revision
September 6, 2023 17:55 11m 29s
Merge branch 'main' into code-revision
tests #547: Commit 61ebefd pushed by miltondp
September 6, 2023 17:09 8m 21s code-revision
September 6, 2023 17:09 8m 21s
setup.py: fix dependencies and require numpy>=1.21
tests #546: Commit 050cae8 pushed by miltondp
September 6, 2023 17:02 32m 5s main
September 6, 2023 17:02 32m 5s
environment: minor typo
tests #545: Commit c72ecfd pushed by miltondp
September 6, 2023 16:48 11m 47s code-revision
September 6, 2023 16:48 11m 47s
ccc pvalue: decrease the number of permutations
tests #544: Commit 08298b7 pushed by miltondp
September 6, 2023 16:45 8m 34s code-revision
September 6, 2023 16:45 8m 34s
ccc pvalue: split notebook into generate and plots
tests #543: Commit 6995e0f pushed by miltondp
September 6, 2023 03:32 10m 27s code-revision
September 6, 2023 03:32 10m 27s
add notebook to check pvalue distribution
tests #542: Commit d2cedc1 pushed by miltondp
September 5, 2023 13:32 8m 43s code-revision
September 5, 2023 13:32 8m 43s
remove pvalue_chunksize
tests #541: Commit e9cce6a pushed by miltondp
September 5, 2023 04:28 5m 53s code-revision
September 5, 2023 04:28 5m 53s
test_coef: use RandomState object
tests #540: Commit c6da313 pushed by miltondp
September 5, 2023 04:20 5m 45s code-revision
September 5, 2023 04:20 5m 45s
September 5, 2023 04:14 5m 39s
update ccc version to 0.2.0
tests #538: Commit d2f0159 pushed by miltondp
September 3, 2023 08:21 5m 33s code-revision
September 3, 2023 08:21 5m 33s
add more unit tests for pvalue computation
tests #537: Commit 4e773cf pushed by miltondp
September 3, 2023 08:18 5m 9s code-revision
September 3, 2023 08:18 5m 9s