Problems processing with stackStripMap.py (ISCE2) #365

fgdiazm · 2021-10-13T13:07:23Z

fgdiazm
Oct 13, 2021

Hi everyone,

I am trying to process a group of TerraSARX images with stackStripMap.py, I managed to generate the SLCs with unpackFrame_TSX.py.

I am trying to apply stackStripMap.py with the following option

stackStripMap.py -s / home / work / geored-insar / Isce2 / Cartagena / TSX / ASC / SLC / -d / home / work / geored-insar / Isce2 /Cartagena/DEM/demLat_N09_N11_Lon_W077_W074.dem.wgs84 -x '10 .06 10.36 -75.62 -75.23 '-w ./ -W interferogram -m 20190104 --nofocus --zero --azimuth_looks 3 --range_looks 9 - f 0.6 -t 150 -b 250 -S TX

But when I do I get the following message and I have not been able to move forward:

ops @ 4893514da1c7: / home / work / geored-insar / Isce2 / Cartagena / TSX / ASC $ stackStripMap.py -s / home / work / geored-insar / Isce2 / Cartagena / TSX / ASC / SLC / -d / home / work / geored-insar / Isce2 /Cartagena/DEM/demLat_N09_N11_Lon_W077_W074.dem.wgs84 -x '10 .06 10.36 -75.62 -75.23 '-w ./ -W interferogram -m 20190104 --nofocus --zero --azimuth_looks 3 - 9 - f 0.6 -t 150 -b 250 -S TX
/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py:5: DeprecationWarning: the imp module is deprecated in favor of importlib; see the module's documentation for alternative uses
import os, imp, sys, glob
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed software at
https://winsar.unavco.org/software/isce
Sensor is not hard-coded (ers, envisat, alos), will keep default alks
['/ home / work / geored-insar / Isce2 / Cartagena / TSX / ASC / SLC / 20190228', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/isce.log', ' / home / work / geored-insar / Isce2 / Cartagena / TS X / ASC / SLC / 20190104 ',' / home / work / geored-insar / Isce2 / Cartagena / TSX / ASC / SLC / 20200102 ',' / home / work / geored-insar / Isce2 / Cartagena / TSX / ASC / SLC / 20191130 ',' / home / work / geored-insa r / Isce2 / Cartagena / TSX / ASC / SLC / 20190322 ',' / home / work / geored -insar / Isce2 / Cartagena / TSX / ASC / SLC / 20190914 ',' / home / work / geored-insar / Isce2 / Cartagena / TSX / ASC / SLC / 20200308 ',' / h ome / work / geored-insar / Isce2 / Cartagena / TSX / ASC / SLC / 20200204 ',' / home / work / geored-insar / Isce2 / Cartagena / TSX / ASC / SLC / 20190607 ',' / home / work / geored-insar / Isce2 / Cartagena / TSX / AS C / SLC / 20191017 ']
['20190104', '20190228', '20190322', '20190607', '20190914', '20191017', '20191130', '20200102', '20200204', '20200308']
Traceback (most recent call last):
File "/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py", line 363, in
main ()
File "/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py", line 336, in main
pairs = selectPairs (inps, stackReferenceDate, secondaryDates, acquisitionDates, doBaselines = True)
File "/opt/isce2/isce2/contrib/stack/stripmapStack/Stack.py", line 745, in selectPairs
baselineDict, timeDict = baselineStack (inps, stackReference, acuisitionDates, doBaselines)
File "/opt/isce2/isce2/contrib/stack/stripmapStack/Stack.py", line 734, in baselineStack
baselineDict [slv] = baselinePair (baselineDir, reference, secondary, doBaselines)
File "/opt/isce2/isce2/contrib/stack/stripmapStack/Stack.py", line 705, in baselinePair
bObj.wireInputPort (name = 'referenceFrame', object = mFrame)
File "/opt/isce2/isce/components/iscesys/Component/Component.py", line 157, in method_with_flow
return method (self) (* args, ** kwargs)
File "/opt/isce2/isce/components/iscesys/Component/Component.py", line 259, in _wirePort
raise PortError ("No% s port named% s"% (port_iterator.flow, name))
iscesys.Component.Component.PortError: 'No input port named referenceFrame'

I appreciate if you can help me solve this problem

Thanks

fdelgadodelapuente · 2021-10-29T12:19:11Z

fdelgadodelapuente
Oct 29, 2021

Hi,

the following command works well

stackStripMap.py -W interferogram -z --nofocus -s slcs -m 20121001 -d /data/francisco/yellowstone/dem/yellowstone_ned_isce.dem -t 800 -b 200 -a 8 -r 8 -u snaphu -f 0.5

0 replies

fgdiazm · 2022-01-14T14:57:25Z

fgdiazm
Jan 14, 2022
Author

Hello Francisco,

Thanks for your suggestion but it didn't work, I tried with the option:

stackStripMap.py -W interferogram -z --nofocus -s /home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/ -m 20190104 -d /home/work/geored-insar/Isce2/Cartagena/ DEM/demLat_N09_N11_Lon_W077_W074.dem.wgs84 -t 800 -b 200 -a 8 -r 8 -u snaphu -f 0.5

but i got the following error
/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py:5: DeprecationWarning: the imp module is deprecated in favor of importlib; see the module's documentation for alternative uses
import os, imp, sys, glob
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed software at
https://winsar.unavco.org/software/isce
['/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190228', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/isce.log', ' /home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190104', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20200102', '/home/work /geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20191130', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190322', '/home/work/geored-insar /Isce2/Cartagena/TSX/ASC/SLC/20190914', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20200308', '/home/work/geored-insar/Isce2/Cartagena /TSX/ASC/SLC/20200204', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190607', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC /SLC/20191017']
['20190104', '20190228', '20190322', '20190607', '20190914', '20191017', '20191130', '20200102', '20200204', '20200308']
Traceback (most recent call last):
File "/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py", line 363, in
main()
File "/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py", line 333, in main
if inps.sensor.lower() == 'uavsar_stack': # don't try to calculate baselines for UAVSAR_STACK data
AttributeError: 'NoneType' object has no attribute 'lower'

I don't know if this message:

/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py:5: DeprecationWarning: the imp module is deprecated in favor of importlib; see the module's documentation for alternative uses

Requires some additional installation or configuration

1 reply

fdelgadodelapuente Jan 14, 2022

Change the following lines in

if inps.sensor and inps.sensor.lower() == 'uavsar_stack':    # don't try to calculate baselines for UAVSAR_STACK data
    pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=False)
else:
    pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=True)

with

pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=True)

fgdiazm · 2022-01-14T15:01:18Z

fgdiazm
Jan 14, 2022
Author

now i tried with

stackStripMap.py -W interferogram -z --nofocus -s /home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/ -m 20190104 -d /home/work/geored-insar/Isce2/Cartagena/ DEM/demLat_N09_N11_Lon_W077_W074.dem.wgs84 -t 800 -b 200 -a 8 -r 8 -u snaphu -f 0.5 -S TX

And in this case, I got the following message:

/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py:5: DeprecationWarning: the imp module is deprecated in favor of importlib; see the module's documentation for alternative uses
import os, imp, sys, glob
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed software at
https://winsar.unavco.org/software/isce
Sensor is not hard-coded (ers, envisat, alos), will keep default alks
['/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190228', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/isce.log', ' /home/work/geored-insar/Isce2/Cartagena/T SX/ASC/SLC/20190104', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20200102', '/home/ work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20191130', '/home/work/geored-in sar/Isce2/Cartagena/TSX/ASC/SLC/20190322', '/home/work/geored -insar/Isce2/Cartagena/TSX/ASC/SLC/20190914', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20200308', '/home/work/geored-insar/Isce2 /Cartagena/TSX/ASC/SLC/20200204', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190607', '/home/work/geored-insar/Isce2/Cartagena/TS X/ASC/SLC/20191017']
['20190104', '20190228', '20190322', '20190607', '20190914', '20191017', '20191130', '20200102', '20200204', '20200308']
Traceback (most recent call last):
File "/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py", line 363, in
main()
File "/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap.py", line 336, in main
pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=True)
File "/opt/isce2/isce2/contrib/stack/stripmapStack/Stack.py", line 745, in selectPairs
baselineDict, timeDict = baselineStack(inps, stackReference, acuisitionDates,doBaselines)
File "/opt/isce2/isce2/contrib/stack/stripmapStack/Stack.py", line 734, in baselineStack
baselineDict[slv]=baselinePair(baselineDir, reference, secondary, doBaselines)
File "/opt/isce2/isce2/contrib/stack/stripmapStack/Stack.py", line 705, in baselinePair
bObj.wireInputPort(name='referenceFrame', object=mFrame)
File "/opt/isce2/isce/components/iscesys/Component/Component.py", line 157, in method_with_flow
return method(self)(*args, **kwargs)
File "/opt/isce2/isce/components/iscesys/Component/Component.py", line 259, in _wirePort
raise PortError("No %s port named %s" % (port_iterator.flow, name))
iscesys.Component.Component.PortError: 'No input port named referenceFrame'

Is it the same case of the previous message?

1 reply

fdelgadodelapuente Jan 14, 2022

Don't add the -S flag. It is not necessary as you already specified the pixel ratio in the number of looks

fgdiazm · 2022-01-17T16:32:04Z

fgdiazm
Jan 17, 2022
Author

Hello Francisco,

I made a copy of stackStripMap.py and tried to change the line in the following ways:

one)
if inps.sensor.lower() == 'uavsar_stack': # don't try to calculate baselines for UAVSAR_STACK data
pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=True)
else:
pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=True)
print ('number of pairs: ', len(pairs))

but i get the following error

ops@ebedd7272f41:/opt/isce2/isce2/contrib/stack/stripmapStack$ stackStripMap_modtry2.py -W interferogram -z --nofocus -s /home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/ - m 20190104 -d /home/work/geored-insar/Isce2/Cartagena/DEM/demLat_N09_N11_Lon_W077_W074.dem.wgs84 -t 800 -b 200 -a 8 -r 8 -u snaphu -f 0.5
/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap_modtry2.py:5: DeprecationWarning: the imp module is deprecated in favor of importlib; see the module's documentation for alternative uses
import os, imp, sys, glob
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed software at
https://winsar.unavco.org/software/isce
['/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190228', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/isce.log', ' /home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190104', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20200102', '/home/work /geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20191130', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190322', '/home/work/geored-insar /Isce2/Cartagena/TSX/ASC/SLC/20190914', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20200308', '/home/work/geored-insar/Isce2/Cartagena /TSX/ASC/SLC/20200204', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/20190607', '/home/work/geored-insar/Isce2/Cartagena/TSX/ASC /SLC/20191017']
['20190104', '20190228', '20190322', '20190607', '20190914', '20191017', '20191130', '20200102', '20200204', '20200308']
Traceback (most recent call last):
File "/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap_modtry2.py", line 363, in
main()
File "/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap_modtry2.py", line 333, in main
if inps.sensor.lower() == 'uavsar_stack': # don't try to calculate baselines for UAVSAR_STACK data
AttributeError: 'NoneType' object has no attribute 'lower'

Sorry if I didn't understand

0 replies

fgdiazm · 2022-01-17T16:35:57Z

fgdiazm
Jan 17, 2022
Author

On the other hand I deleted

if inps.sensor and inps.sensor.lower() == 'uavsar_stack': # don't try to calculate baselines for UAVSAR_STACK data
pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=False)
else:
pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=True)

and I just left

pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=True)

and it looks like this:

stackStripMap_mod20220117.py -W interferogram -z --nofocus -s /home/work/geored-insar/Isce2/Cartagena/TSX/ASC/SLC/ -m 20190104 -d /home/work/geored-insar/Isce2/Cartagena/ DEM/demLat_N09_N11_Lon_W077_W074.dem.wgs84 -t 800 -b 200 -a 8 -r 8 -u snaphu -f 0.5
File "/opt/isce2/isce2/contrib/stack/stripmapStack/stackStripMap_mod20220117.py", line 333
pairs = selectPairs(inps,stackReferenceDate, secondaryDates, acquisitionDates,doBaselines=True)
^
IndentationError: unexpected indent

0 replies

volter29 · 2022-03-31T12:26:09Z

volter29
Mar 31, 2022

HI @fgdiazm
inside the SLC folder you will find a series of data called raw.bak raw.dat raw.dir. Once deleted, restart stackStripmap

0 replies

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Problems processing with stackStripMap.py (ISCE2) #365

{{title}}

Replies: 6 comments 2 replies

{{title}}

{{title}}

{{title}}

{{title}}

{{title}}

{{title}}

{{title}}

{{title}}

Select a reply

Problems processing with stackStripMap.py (ISCE2) #365

fgdiazm Oct 13, 2021

Replies: 6 comments · 2 replies

fdelgadodelapuente Oct 29, 2021

fgdiazm Jan 14, 2022 Author

fdelgadodelapuente Jan 14, 2022

fgdiazm Jan 14, 2022 Author

fdelgadodelapuente Jan 14, 2022

fgdiazm Jan 17, 2022 Author

fgdiazm Jan 17, 2022 Author

volter29 Mar 31, 2022

fgdiazm
Oct 13, 2021

Replies: 6 comments 2 replies

fdelgadodelapuente
Oct 29, 2021

fgdiazm
Jan 14, 2022
Author

fgdiazm
Jan 14, 2022
Author

fgdiazm
Jan 17, 2022
Author

fgdiazm
Jan 17, 2022
Author

volter29
Mar 31, 2022