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README.md

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Adverse drug reactions (ADRs)

ADRs data collection for CYP3A4 substrates has been completed.

Drafts of documents:

0_Ideas.qmd - the very early brainstorming of ideas for this project with some background information

1_ADR_data.qmd - all notes on ADRs and also a list of reference sources for the ADRs data

2_ADR_test.ipynb - current work-in-progress notebook trying to build a DNN model to predict therapeutic drug classes for CYP3A4 substrates (which are also drugs)

Other files:

  • A few different Python scripts for use in the notebook (to be explained later)
  • A few different .tsv/.csv files of CYP3A4 substrates data or the SMILES of these substrates (to be explained later)