README.txt

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Asymmetric fibre orientation distributions (aFODs)

Matteo Bastiani, FMRIB
Michiel Cottaar, FMRIB
Paul McCarthy, FMRIB
May 2018
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Library that allows the estimation of asymmetric FODs from diffusion
MRI data.

If you use this package in your work, please cite the following article:
Bastiani, M., Cottaar, M., Dikranian, K., Ghosh, A., Zhang, H., Alexander, D.C., Behrens, T.E., Jbabdi, S., Sotiropoulos, S.N., 2017. Improved tractography using asymmetric fibre orientation distributions. Neuroimage 158, 205-218. 


Installation
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The package can be installed using the setup.py file provided by running:
python setup.py install

or using pip. 

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Tutorial
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A jupyter-notebook (http://jupyter.org) file is included in the repository:
aFOD/tutorial/afod_tutorial.ipynb

explaining the different steps needed to estimate aFODs.