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DESCRIPTION
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DESCRIPTION
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Package: DirichletMultinomial
Type: Package
Title: Dirichlet-Multinomial Mixture Model Machine Learning for
Microbiome Data
Version: 1.47.2
Authors@R: person(
"Martin", "Morgan", role = c("aut", "cre"),
email = "mtmorgan.xyz@gmail.com",
comment = c(ORCID = "0000-0002-5874-8148"))
Description: Dirichlet-multinomial mixture models can be used to
describe variability in microbial metagenomic data. This
package is an interface to code originally made available by
Holmes, Harris, and Quince, 2012, PLoS ONE 7(2): 1-15, as
discussed further in the man page for this package,
?DirichletMultinomial.
License: LGPL-3
Depends: S4Vectors, IRanges
Imports: stats4, methods, BiocGenerics
Suggests:
lattice,
parallel,
MASS,
RColorBrewer,
DT,
knitr,
rmarkdown,
BiocStyle
Collate: AllGenerics.R dmn.R dmngroup.R roc.R util.R
SystemRequirements: gsl
biocViews: ImmunoOncology, Microbiome, Sequencing, Clustering, Classification,
Metagenomics
VignetteBuilder: knitr
URL: https://mtmorgan.github.io/DirichletMultinomial/
BugReports: https://github.com/mtmorgan/DirichletMultinomial/issues