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DESCRIPTION
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DESCRIPTION
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Package: cellxgenedp
Title: Discover and Access Single Cell Data Sets in the CELLxGENE Data Portal
Version: 1.9.1
Authors@R:
c(person(
given = "Martin",
family = "Morgan",
role = c("aut", "cre"),
email = "mtmorgan.bioc@gmail.com",
comment = c(ORCID = "0000-0002-5874-8148")
),
person("Kayla", "Interdonato", role = "aut"))
Description: The cellxgene data portal
(https://cellxgene.cziscience.com/) provides a graphical user
interface to collections of single-cell sequence data processed in
standard ways to 'count matrix' summaries. The cellxgenedp package
provides an alternative, R-based inteface, allowind data
discovery, viewing, and downloading.
License: Artistic-2.0
Encoding: UTF-8
Collate: db.R collections.R datasets.R files.R facets.R keys.R
cellxgene.R utilities.R publisher_metadata.R cxg.R
Depends: dplyr
Imports: httr, curl, utils, tools, cli, shiny, DT, rjsoncons
Suggests:
zellkonverter,
SingleCellExperiment,
HDF5Array,
tidyr,
BiocStyle,
knitr,
rmarkdown,
testthat (>= 3.0.0),
mockery
biocViews: SingleCell, DataImport, ThirdPartyClient
URL: https://mtmorgan.github.io/cellxgenedp/, https://github.com/mtmorgan/cellxgenedp
BugReports: https://github.com/mtmorgan/cellxgenedp/issues
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Config/testthat/edition: 3