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config_machines.xml
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config_machines.xml
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<?xml version="1.0"?>
<!-- This is an ordered list, not all fields are required, optional fields are noted below. -->
<config_machines version="2.0">
<!-- MACH is the name that you will use in machine options -->
<machine MACH="maui">
<!-- DESC: a text description of the machine, this field is current not used in code-->
<DESC>NeSI Cray XC50 Skylake, os is CNL, 40 pes/node, batch system is Slurm</DESC>
<!-- NODENAME_REGEX: a regular expression used to identify this machine
it must work on compute nodes as well as login nodes, use machine option
to create_test or create_newcase if this flag is not available -->
<NODENAME_REGEX>(maui01|maui02|nid.*)</NODENAME_REGEX>
<!-- OS: the operating system of this machine. Passed to cppflags for
compiled programs as -DVALUE recognized are LINUX, AIX, Darwin, CNL -->
<OS>CNL</OS>
<!-- COMPILERS: compilers supported on this machine, comma seperated list, first is default -->
<COMPILERS>intel,gnu,cray</COMPILERS>
<!-- MPILIBS: mpilibs supported on this machine, comma seperated list,
first is default, mpi-serial is assumed and not required in this list-->
<MPILIBS>mpt</MPILIBS>
<!-- PROJECT: A project or account number used for batch jobs
This value is used for directory names. If different from
actual accounting project id, use CHARGE_ACCOUNT
can be overridden in environment or $HOME/.cime/config -->
<PROJECT>nesi99999</PROJECT>
<!-- CHARGE_ACCOUNT: A project or account number used for batch jobs
This is the actual project used for cost accounting set in
the batch script (ex. #PBS -A charge_account). Will default
to PROJECT if not set.
can be overridden in environment or $HOME/.cime/config -->
<CHARGE_ACCOUNT>nesi99999</CHARGE_ACCOUNT>
<!-- SAVE_TIMING_DIR: (Acme only) directory for archiving timing output -->
<SAVE_TIMING_DIR> </SAVE_TIMING_DIR>
<!-- SAVE_TIMING_DIR_PROJECTS: (Acme only) projects whose jobs archive timing output -->
<SAVE_TIMING_DIR_PROJECTS> </SAVE_TIMING_DIR_PROJECTS>
<!-- CIME_OUTPUT_ROOT: Base directory for case output,
the case/bld and case/run directories are written below here -->
<CIME_OUTPUT_ROOT>/nesi/nobackup/nesi99999/$USER/cesm/output</CIME_OUTPUT_ROOT>
<!-- DIN_LOC_ROOT: location of the inputdata data directory
inputdata is downloaded automatically on a case by case basis as
long as the user has write access to this directory. We recommend that
all cime model users on a system share an inputdata directory
as it can be quite large -->
<DIN_LOC_ROOT>/nesi/nobackup/nesi99999/cesm/inputdata</DIN_LOC_ROOT>
<!-- DIN_LOC_ROOT_CLMFORC: override of DIN_LOC_ROOT specific to CLM
forcing data -->
<DIN_LOC_ROOT_CLMFORC>/nesi/nobackup/nesi99999/cesm/lmwg</DIN_LOC_ROOT_CLMFORC>
<!-- DOUT_S_ROOT: root directory of short term archive files, short term
archiving moves model output data out of the run directory, but
keeps it on disk-->
<DOUT_S_ROOT>/nesi/nobackup/nesi99999/$USER/cesm/archive/$CASE</DOUT_S_ROOT>
<!-- BASELINE_ROOT: Root directory for system test baseline files -->
<BASELINE_ROOT>/nesi/nobackup/nesi99999/$USER/cesm/cesm_baselines</BASELINE_ROOT>
<!-- CCSM_CPRNC: location of the cprnc tool, compares model output in testing-->
<CCSM_CPRNC>$ENV{CESMDATAROOT}/tools/cime/tools/cprnc/cprnc.cheyenne</CCSM_CPRNC>
<!-- GMAKE: gnu compatible make tool, default is 'gmake' -->
<GMAKE>make</GMAKE>
<!-- GMAKE_J: optional number of threads to pass to the gmake flag -->
<GMAKE_J>8</GMAKE_J>
<!-- BATCH_SYSTEM: batch system used on this machine,
supported values are: none, cobalt, lsf, pbs, slurm -->
<BATCH_SYSTEM>slurm</BATCH_SYSTEM>
<!-- SUPPORTED_BY: contact information for support for this system
this field is not used in code -->
<SUPPORTED_BY>support@nesi.org.nz</SUPPORTED_BY>
<!-- MAX_TASKS_PER_NODE: maximum number of threads*tasks per
shared memory node on this machine,
should always be >= MAX_MPITASKS_PER_NODE -->
<MAX_TASKS_PER_NODE>40</MAX_TASKS_PER_NODE>
<!-- MAX_MPITASKS_PER_NODE: number of physical PES per shared node on
this machine, in practice the MPI tasks per node will not exceed this value -->
<MAX_MPITASKS_PER_NODE>40</MAX_MPITASKS_PER_NODE>
<!-- PROJECT_REQUIRED: Does this machine require a project to be specified to
the batch system? See PROJECT above -->
<PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED>
<!-- mpirun: The mpi exec to start a job on this machine, supported values
are values listed in MPILIBS above, default and mpi-serial -->
<mpirun mpilib="default">
<!-- name of the exectuable used to launch mpi jobs -->
<executable>srun</executable>
<!-- arguments to the mpiexec command, the name attribute here is ignored-->
<!--<arguments>
<arg name="labelstdout">-p "%g:"</arg>
<arg name="threadplacement"> omplace </arg>
</arguments>-->
</mpirun>
<mpirun mpilib="mpi-serial">
<executable></executable>
</mpirun>
<!-- module system: allowed module_system type values are:
module http://www.tacc.utexas.edu/tacc-projects/mclay/lmod
soft http://www.mcs.anl.gov/hs/software/systems/softenv/softenv-intro.html
none
-->
<module_system type="module">
<init_path lang="perl">/opt/modules/default/init/perl.pm</init_path>
<init_path lang="python">/opt/modules/default/init/python.py</init_path>
<init_path lang="sh">/opt/modules/default/init/sh</init_path>
<init_path lang="csh">/opt/modules/default/init/csh</init_path>
<cmd_path lang="perl">/opt/modules/default/bin/modulecmd perl</cmd_path>
<cmd_path lang="python">/opt/modules/default/bin/modulecmd python</cmd_path>
<cmd_path lang="sh">module</cmd_path>
<cmd_path lang="csh">module</cmd_path>
<modules>
<command name="unload">craype-x86-skylake</command>
<command name="unload">craype-broadwell</command>
<command name="unload">PrgEnv-intel</command>
<command name="unload">PrgEnv-cray</command>
<command name="unload">PrgEnv-gnu</command>
<command name="unload">cray-netcdf</command>
<command name="unload">cray-parallel-netcdf</command>
</modules>
<modules compiler="intel">
<command name="load">PrgEnv-intel/6.0.10</command>
<command name="load">craype-x86-skylake</command>
</modules>
<modules compiler="gnu">
<command name="load">PrgEnv-gnu/6.0.10</command>
<command name="load">craype-x86-skylake</command>
</modules>
<modules compiler="cray">
<command name="load">PrgEnv-cray/6.0.10</command>
<command name="load">craype-x86-skylake</command>
</modules>
<modules mpilib="mpi-serial">
<command name="load">cray-netcdf/4.9.0.3</command>
</modules>
<modules mpilib="mpt">
<command name="load">cray-netcdf/4.9.0.3</command>
<command name="load">cray-parallel-netcdf/1.12.3.3</command>
</modules>
</module_system>
<!-- environment variables, a blank entry will unset a variable -->
<environment_variables>
<env name="OMP_STACKSIZE">256M</env>
<env name="MPI_TYPE_DEPTH">16</env>
<env name="MPICH_GNI_MAX_EAGER_MSG_SIZE">65536</env>
<env name="HDF5_USE_FILE_LOCKING">FALSE</env>
</environment_variables>
<!-- resource settings as defined in https://docs.python.org/2/library/resource.html -->
<resource_limits>
<resource name="RLIMIT_STACK">-1</resource>
</resource_limits>
</machine>
<machine MACH="mahuika">
<!-- DESC: a text description of the machine, this field is current not used in code-->
<DESC>NeSI Cray CS400 Milan, os is RedHat, 128 pes/node, batch system is Slurm</DESC>
<!-- NODENAME_REGEX: a regular expression used to identify this machine
it must work on compute nodes as well as login nodes, use machine option
to create_test or create_newcase if this flag is not available -->
<NODENAME_REGEX>(mahuika01|mahuika02|wb.*|wm.*)</NODENAME_REGEX>
<!-- OS: the operating system of this machine. Passed to cppflags for
compiled programs as -DVALUE recognized are LINUX, AIX, Darwin, CNL -->
<OS>LINUX</OS>
<!-- COMPILERS: compilers supported on this machine, comma seperated list, first is default -->
<COMPILERS>intel,gnu</COMPILERS>
<!-- MPILIBS: mpilibs supported on this machine, comma seperated list,
first is default, mpi-serial is assumed and not required in this list-->
<MPILIBS compiler="intel">impi</MPILIBS>
<MPILIBS compiler="gnu">openmpi</MPILIBS>
<!-- PROJECT: A project or account number used for batch jobs
This value is used for directory names. If different from
actual accounting project id, use CHARGE_ACCOUNT
can be overridden in environment or $HOME/.cime/config -->
<PROJECT>nesi99999</PROJECT>
<!-- CHARGE_ACCOUNT: A project or account number used for batch jobs
This is the actual project used for cost accounting set in
the batch script (ex. #PBS -A charge_account). Will default
to PROJECT if not set.
can be overridden in environment or $HOME/.cime/config -->
<CHARGE_ACCOUNT>nesi99999</CHARGE_ACCOUNT>
<!-- SAVE_TIMING_DIR: (Acme only) directory for archiving timing output -->
<SAVE_TIMING_DIR> </SAVE_TIMING_DIR>
<!-- SAVE_TIMING_DIR_PROJECTS: (Acme only) projects whose jobs archive timing output -->
<SAVE_TIMING_DIR_PROJECTS> </SAVE_TIMING_DIR_PROJECTS>
<!-- CIME_OUTPUT_ROOT: Base directory for case output,
the case/bld and case/run directories are written below here -->
<CIME_OUTPUT_ROOT>/nesi/nobackup/nesi99999/$USER/cesm/output</CIME_OUTPUT_ROOT>
<!-- DIN_LOC_ROOT: location of the inputdata data directory
inputdata is downloaded automatically on a case by case basis as
long as the user has write access to this directory. We recommend that
all cime model users on a system share an inputdata directory
as it can be quite large -->
<DIN_LOC_ROOT>/nesi/nobackup/nesi99999/cesm/inputdata</DIN_LOC_ROOT>
<!-- DIN_LOC_ROOT_CLMFORC: override of DIN_LOC_ROOT specific to CLM
forcing data -->
<DIN_LOC_ROOT_CLMFORC>/nesi/nobackup/nesi99999/cesm/lmwg</DIN_LOC_ROOT_CLMFORC>
<!-- DOUT_S_ROOT: root directory of short term archive files, short term
archiving moves model output data out of the run directory, but
keeps it on disk-->
<DOUT_S_ROOT>/nesi/nobackup/nesi99999/$USER/cesm/archive/$CASE</DOUT_S_ROOT>
<!-- BASELINE_ROOT: Root directory for system test baseline files -->
<BASELINE_ROOT>/nesi/nobackup/nesi99999/$USER/cesm/cesm_baselines</BASELINE_ROOT>
<!-- CCSM_CPRNC: location of the cprnc tool, compares model output in testing-->
<CCSM_CPRNC>$ENV{CESMDATAROOT}/tools/cime/tools/cprnc/cprnc.cheyenne</CCSM_CPRNC>
<!-- GMAKE: gnu compatible make tool, default is 'gmake' -->
<GMAKE>make</GMAKE>
<!-- GMAKE_J: optional number of threads to pass to the gmake flag -->
<GMAKE_J>8</GMAKE_J>
<!-- BATCH_SYSTEM: batch system used on this machine,
supported values are: none, cobalt, lsf, pbs, slurm -->
<BATCH_SYSTEM>slurm</BATCH_SYSTEM>
<!-- SUPPORTED_BY: contact information for support for this system
this field is not used in code -->
<SUPPORTED_BY>support@nesi.org.nz</SUPPORTED_BY>
<!-- MAX_TASKS_PER_NODE: maximum number of threads*tasks per
shared memory node on this machine,
should always be >= MAX_MPITASKS_PER_NODE -->
<MAX_TASKS_PER_NODE>128</MAX_TASKS_PER_NODE>
<!-- MAX_MPITASKS_PER_NODE: number of physical PES per shared node on
this machine, in practice the MPI tasks per node will not exceed this value -->
<MAX_MPITASKS_PER_NODE>128</MAX_MPITASKS_PER_NODE>
<!-- PROJECT_REQUIRED: Does this machine require a project to be specified to
the batch system? See PROJECT above -->
<PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED>
<!-- mpirun: The mpi exec to start a job on this machine, supported values
are values listed in MPILIBS above, default and mpi-serial -->
<mpirun mpilib="default">
<!-- name of the exectuable used to launch mpi jobs -->
<executable>srun</executable>
<!-- arguments to the mpiexec command, the name attribute here is ignored-->
<arguments>
<arg name="kill-on-bad-exit">--kill-on-bad-exit</arg>
</arguments>
</mpirun>
<mpirun mpilib="mpi-serial">
<executable></executable>
</mpirun>
<!-- module system: allowed module_system type values are:
module http://www.tacc.utexas.edu/tacc-projects/mclay/lmod
soft http://www.mcs.anl.gov/hs/software/systems/softenv/softenv-intro.html
none
-->
<module_system type="module">
<init_path lang="perl">/usr/share/lmod/lmod/init/perl</init_path>
<init_path lang="python">/usr/share/lmod/lmod/init/env_modules_python.py</init_path>
<init_path lang="csh">/usr/share/lmod/lmod/init/csh</init_path>
<init_path lang="sh">/usr/share/lmod/lmod/init/sh</init_path>
<cmd_path lang="perl">/usr/share/lmod/lmod/libexec/lmod perl -q --force</cmd_path>
<cmd_path lang="python">/usr/share/lmod/lmod/libexec/lmod python -q --force</cmd_path>
<cmd_path lang="sh">module -q --force</cmd_path>
<cmd_path lang="csh">module -q --force</cmd_path>
<modules>
<command name="purge"></command>
<command name="load">NeSI</command>
<command name="load">CMake/3.27.7</command>
<command name="load">git/2.23.3</command>
</modules>
<modules compiler="gnu">
<command name="load">foss/2023a</command>
<command name="load">Perl/5.38.2-GCC-12.3.0</command>
<command name="load">netCDF/4.9.2-gompi-2023a</command>
<command name="load">netCDF-Fortran/4.6.1-gompi-2023a</command>
<command name="load">PnetCDF/1.13.0-gompi-2023a</command>
</modules>
<modules compiler="intel">
<command name="load">intel/2022a</command>
<command name="load">Perl/5.34.1-GCC-11.3.0</command>
<command name="load">netCDF/4.8.1-iimpi-2022a</command>
<command name="load">netCDF-Fortran/4.6.0-iimpi-2022a</command>
<command name="load">PnetCDF/1.13.0-iimpi-2022a</command>
</modules>
</module_system>
<!-- environment variables, a blank entry will unset a variable -->
<environment_variables>
<env name="OMP_STACKSIZE">256M</env>
<env name="MPI_TYPE_DEPTH">16</env>
</environment_variables>
<!-- resource settings as defined in https://docs.python.org/2/library/resource.html -->
<resource_limits>
<resource name="RLIMIT_STACK">-1</resource>
</resource_limits>
</machine>
</config_machines>