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Allow for spike-ins #369

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fevac opened this issue Jun 22, 2023 · 0 comments
Open

Allow for spike-ins #369

fevac opened this issue Jun 22, 2023 · 0 comments
Milestone
3.0.0

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@fevac
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fevac commented Jun 22, 2023

Description of feature

It would be nice to allow the use of spike-ins (e.g. ERCC). nf-core/rnaseq allows this by providing an --additional_fasta that appends the sequences and the appropriate intervals in the GTF. I wonder if something similar could be done here
@rannick rannick added this to the 3.0.0 milestone Sep 4, 2023
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@fevac @rannick