render-readme.yml

# Render readme, based on 
# https://raw.githubusercontent.com/r-lib/actions/master/.github/workflows/render-readme.yaml
name: Render README
on:
  workflow_dispatch:
jobs:
  render:
    name: Render README
    runs-on: ubuntu-latest
    env:
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
    steps:
      - uses: actions/checkout@v2
      - uses: r-lib/actions/setup-r@v2
        with:
          use-public-rspm: true
      - uses: r-lib/actions/setup-pandoc@v2
      - name: Install rmarkdown, remotes, and the local package
        run: |
          install.packages("devtools")
          devtools::install_local(".")
          devtools::install_cran("rmarkdown")
        shell: Rscript {0}
      - name: Render README
        run: Rscript -e 'rmarkdown::render("README.Rmd")'
        
      - name: replace the data for bookdown
        run: |
          mv run_SSMSE-ex/results/SSMSE_scalar.csv inst/bookdown/data/SSMSE_scalar.csv
          mv run_SSMSE-ex/results/SSMSE_ts.csv inst/bookdown/data/SSMSE_ts.csv
          
      - name: Create Pull Request
        uses: peter-evans/create-pull-request@v3
        with:
          commit-message: 'docs: update readme'
          add-paths: |
            README.md
            inst/bookdown/data/SSMSE_scalar.csv
            inst/bookdown/data/SSMSE_ts.csv
            man/figures/README*.png
          branch: update-readme
          title: 'Update readme'
          body: |
           Auto-generated by [render-readme.yml][1]
             [1]: https://github.com/nmfs-fish-tools/SSMSE/tree/main/.github/workflows/render-readme.yml