Spatial and spatiotemporal GLMMs with TMB
sdmTMB is an R package that fits spatial and spatiotemporal GLMMs (Generalized Linear Mixed Effects Models) using Template Model Builder (TMB), R-INLA, and Gaussian Markov random fields. One common application is for species distribution models (SDMs). See the documentation site and a preprint:
Anderson, S.C., E.J. Ward, P.A. English, L.A.K. Barnett, J.T. Thorson. 2024. sdmTMB: an R package for fast, flexible, and user-friendly generalized linear mixed effects models with spatial and spatiotemporal random fields. bioRxiv 2022.03.24.485545; doi: https://doi.org/10.1101/2022.03.24.485545