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README
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README
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_______ _______ _______ ______ ___ ___
| __| ___| | | | __ \ | |
|__ | ___| | __ | __/\ /
|_______|_______|__|____| |__| |___| |___|
Serializer/Encoder for various proteomics files
Update timsdata.py with new version from pe-py-timscore (Dia) package
ms2 vs ms2_fast
ms2_fast parses ~10x faster
doesnt store spectra
deserializes elements upon request
DTASelect-Filter.txt (refactored)
supported versions:
v2.1.12
v2.1.13
v2.1.12_paser
DTASelect.txt (in progress)
supported versions:
?
*.feature (need refactor)
supported versions:
biosaur
dinosuar
*.ms2 (refactored)
supported instruments:
timstof
*.fasta (done)
supported versions:
check biopython
*.idx (done)
supported versions:
???
*.out (need refactor)
supported versions:
???
*.sqt (refactored)
supported versions:
v1.4
v2.1.0 <-- timsscore
v2.1.0_ext <-- timsscore_ext