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setup.py
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setup.py
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from setuptools import setup, find_packages
with open('README.md') as readme_file:
readme = readme_file.read()
# Setting up
setup(
name="pgp_reconstruction",
version='0.0.6',
author="rcolpo (Rodrigo Amarante Colpo)",
author_email="<rodrigocolpo@gmail.com>",
description='Pathway-Guided Pruning Reconstruction of constraint-based metabolic models',
long_description_content_type="text/markdown",
long_description = readme,
packages=find_packages(),
include_package_data=True,
install_requires=["reframed>=1.2.1", "pandas>=1.0", "cobra"],
license="Apache Software License 2.0",
keywords=['python', 'carveme', 'PGP Reconstruction', 'gapseq'],
classifiers=[
'Development Status :: 2 - Pre-Alpha',
'Environment :: Console',
'Intended Audience :: Science/Research',
'Topic :: Scientific/Engineering :: Bio-Informatics',
'Programming Language :: Python :: 3',
'License :: OSI Approved :: Apache Software License',
],
)