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Please add alt text to your posts

Please add alt text (alternative text) to all of your posted graphics for #TidyTuesday.

Twitter provides guidelines for how to add alt text to your images.

The DataViz Society/Nightingale by way of Amy Cesal has an article on writing good alt text for plots/graphs.

Here's a simple formula for writing alt text for data visualization:

Chart type

It's helpful for people with partial sight to know what chart type it is and gives context for understanding the rest of the visual. Example: Line graph

Type of data

What data is included in the chart? The x and y axis labels may help you figure this out. Example: number of bananas sold per day in the last year

Reason for including the chart

Think about why you're including this visual. What does it show that's meaningful. There should be a point to every visual and you should tell people what to look for. Example: the winter months have more banana sales

Link to data or source

Don't include this in your alt text, but it should be included somewhere in the surrounding text. People should be able to click on a link to view the source data or dig further into the visual. This provides transparency about your source and lets people explore the data. Example: Data from the USDA

Penn State has an article on writing alt text descriptions for charts and tables.

Charts, graphs and maps use visuals to convey complex images to users. But since they are images, these media provide serious accessibility issues to colorblind users and users of screen readers. See the examples on this page for details on how to make charts more accessible.

The {rtweet} package includes the ability to post tweets with alt text programatically.

Need a reminder? There are extensions that force you to remember to add Alt Text to Tweets with media.

Project FeederWatch

The data this week comes from the Project FeederWatch.

FeederWatch is a November-April survey of birds that visit backyards, nature centers, community areas, and other locales in North America. Citizen scientists could birds in areas with plantings, habitat, water, or food that attracts birds. The schedule is completely flexible. People count birds as long as they like on days of their choosing, then enter their counts online. This allows anyone to track what is happening to birds around your home and to contribute to a continental data-set of bird distribution and abundance.

FeederWatch data show which bird species visit feeders at thousands of locations across the continent every winter. The data also indicate how many individuals of each species are seen. This information can be used to measure changes in the winter ranges and abundances of bird species over time.

A subset of the 2021 data is included for this TidyTuesday, but data available through 1988 is available for download on FeederWatch Raw Dataset Downloads page

Project FeederWatch is operated by the Cornell Lab of Ornithology and Birds Canada. Since 2016, Project FeederWatch has been sponsored by Wild Bird Unlimited.

Acknowledging FeederWatch.

The Cornell Lab of Ornithology and Birds Canada are committed to making data gathered through our citizen science programs freely accessible to students, journalists, and the general public."

"This unique dataset is completely dependent on the efforts of our network of volunteer participants. We ask that all data analysts give credit to the thousands of participants who have made FeederWatch possible, as well as to Birds Canada and the Cornell Lab of Ornithology for developing and managing the program."

Examples of analyses are included with the raw data and there is a section to Explore the data.

More details on analyzing this dataset:
Over 30 Years of Standardized Bird Counts at Supplementary Feeding Stations in North America: A Citizen Science Data Report for Project FeederWatch by David N. Bonter and Emma I. Greig

Get the data here

# Get the Data

# Read in with tidytuesdayR package 
# Install from CRAN via: install.packages("tidytuesdayR")
# This loads the readme and all the datasets for the week of interest

# Either ISO-8601 date or year/week works!

tuesdata <- tidytuesdayR::tt_load('2023-01-10')
tuesdata <- tidytuesdayR::tt_load(2023, week = 02)

feederwatch <- tuesdata$feederwatch

# Or read in the data manually

feederwatch <- readr::read_csv('https://raw.githubusercontent.com/rfordatascience/tidytuesday/main/data/2023/2023-01-10/PFW_2021_public.csv')
site_data <- readr::read_csv('https://raw.githubusercontent.com/rfordatascience/tidytuesday/main/data/2023/2023-01-10/PFW_count_site_data_public_2021.csv')

Data Dictionary

The Project FeederWatch Data Dictionary explains all fields and codes used in the database and is essential for understanding the dataset.

PFW_2021_public.csv

variable class description
loc_id character Unique identifier for each survey site
latitude double Latitude in decimal degrees for each survey site
longitude double Longitude in decimal degrees for each survey site
subnational1_code character Country abbreviation and State or Province abbreviation of each survey site. Note that the files may contain some "XX" locations. These are sites that were incorrectly placed by the user (e.g., site plotted in the ocean.)
entry_technique character Variable indicating method of site localization
sub_id character Unique identifier for each checklist
obs_id character Unique identifier for each observation of a species
Month double Month of 1st day of two-day observation period
Day double Day of 1st day of two-day observation period
Year double Year of 1st day of two-day observation period
PROJ_PERIOD_ID character Calendar year of end of FeederWatch season
species_code character Bird species observed, stored as 6-letter species codes
how_many double Maximum number of individuals seen at one time during observation period
valid double Validity of each observation based on flagging system
reviewed double Review state of each observation based on flagging system
day1_am double Variable indicating if observer watched during morning of count Day 1
day1_pm double Variable indicating if observer watched during afternoon of count Day 1
day2_am double Variable indicating if observer watched during morning of count Day 2
day2_pm double Variable indicating if observer watched during afternoon of count Day 2
effort_hrs_atleast double Participant estimate of survey time for each checklist
snow_dep_atleast double Participant estimate of minimum snow depth during a checklist
Data_Entry_Method character Data entry method for each checklist (e.g., web, mobile app or paper form)

PFW_count_site_data_public_2021.csv

variable class description
loc_id character loc_id
proj_period_id character proj_period_id
yard_type_pavement double yard_type_pavement
yard_type_garden double yard_type_garden
yard_type_landsca double yard_type_landsca
yard_type_woods double yard_type_woods
yard_type_desert double yard_type_desert
hab_dcid_woods double habitat type decidious woods
hab_evgr_woods double habitat type evergreen woods
hab_mixed_woods double habitat type mixed woods
hab_orchard double habitat type orchard
hab_park double habitat type park
hab_water_fresh double habitat type fresh water
hab_water_salt double habitat type salt water
hab_residential double habitat type residential
hab_industrial double habitat type industrial
hab_agricultural double habitat type agricultural
hab_desert_scrub double habitat type desert_scrub
hab_young_woods double habitat type young_woods
hab_swamp double habitat type swamp
hab_marsh double habitat type marsh
evgr_trees_atleast double minimum number of trees or shrubs in the count area - evergreen trees
evgr_shrbs_atleast double minimum number of trees or shrubs in the count area - evergreen shrubs
dcid_trees_atleast double minimum number of trees or shrubs in the count area - deciduous trees
dcid_shrbs_atleast double minimum number of trees or shrubs in the count area - deciduous srubs
fru_trees_atleast double minimum number of trees or shrubs in the count area - fruit trees
cacti_atleast double minimum number of trees or shrubs in the count area - cacti
brsh_piles_atleast double minimum number of brush piles located within the count area
water_srcs_atleast double minimum number of water sources located within the count area
bird_baths_atleast double minimum number of bird baths located within the count area
nearby_feeders double presence or absense of feeders
squirrels double do squirrels take food from feeders at least 3 times per week?
cats double are cats active within 30 m of the feeders for at least 30 minutes 3 days per week?
dogs double are dogs active within 30 m of the feeders for at least 30 minutes 3 days per week?
humans double are humans active within 30 m of the feeders for at least 30 minutes 3 days per week?
housing_density double participant estimated housing density of neighborhood
fed_yr_round double fed_yr_round
fed_in_jan double fed_in_jan
fed_in_feb double fed_in_feb
fed_in_mar double fed_in_mar
fed_in_apr double fed_in_apr
fed_in_may double fed_in_may
fed_in_jun double fed_in_jun
fed_in_jul double fed_in_jul
fed_in_aug double fed_in_aug
fed_in_sep double fed_in_sep
fed_in_oct double fed_in_oct
fed_in_nov double fed_in_nov
fed_in_dec double fed_in_dec
numfeeders_suet double numfeeders suet
numfeeders_ground double numfeeders ground
numfeeders_hanging double numfeeders hanging
numfeeders_platfrm double numfeeders platfrm
numfeeders_humming double numfeeders hummingbird
numfeeders_water double numfeeders water dispensers
numfeeders_thistle double numfeeders thistle
numfeeders_fruit double numfeeders fruit
numfeeders_hopper double numfeeders hopper
numfeeders_tube double numfeeders tube
numfeeders_other double numfeeders other
population_atleast double participant estimated population of city or town
count_area_size_sq_m_atleast double participant estimated area of survey site

Cleaning Script

# Download the raw data.

PFW_2021_public <- readr::read_csv("https://clo-pfw-prod.s3.us-west-2.amazonaws.com/data/PFW_2021_public.csv")
dplyr::glimpse(PFW_2021_public)

# There are almost three million rows! The file is too big for github, let's
# subsample.

set.seed(424242)
PFW_2021_public_subset <- dplyr::slice_sample(PFW_2021_public, n = 1e5)

readr::write_csv(PFW_2021_public_subset, here::here("data", "2023", "2023-01-10", "PFW_2021_public.csv"))