_pkgdown.yml

url: https://docs.ropensci.org/canaper/
home:
  title: Categorical Analysis of Neo- and Paleo-endemism in R
  description: |
    Provides functions to conduct categorical analysis of neo- and paleo-endemism (CANAPE) in R.
authors:
  Joel Nitta:
    href: https://joelnitta.com
template:
  params:
    bootswatch: lumen
reference:
- title: Community matrix randomization
- contents:
  - cpr_rand_comm
  - cpr_iter_sim
- title: Randomization tests
  desc: The main focus of this package, conducting randomization tests of biodiversity
    metrics
- contents:
  - cpr_rand_test
- title: Classification
  desc: Functions to classify the results of the randomization test
- contents: starts_with("cpr_classify")
- title: Datasets
  desc: Datasets included in this package
- contents:
  - acacia
  - biod_example
  - phylocom
  - biod_results
- title: Color palettes
  desc: Colors for plotting classification results
- contents:
  - cpr_make_pal
  - mishler_endem_cols
  - cpr_endem_cols
  - cpr_endem_cols_2
  - cpr_endem_cols_3
  - cpr_endem_cols_4
  - mishler_signif_cols
  - cpr_signif_cols
  - cpr_signif_cols_2