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cobramm.ontology.yml
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cobramm.ontology.yml
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---
version: "1.0.0"
namespace: "COBRAMM"
author: Matteo Bonfanti, Giorgio La Civita, Marco Garavelli
ontology:
################ RELATIONSHIPS
HAS_PART:
subclass_of:
- CUBA.ACTIVE_RELATIONSHIP
inverse: COBRAMM.IS_PART_OF
default_rel: true
IS_PART_OF:
subclass_of:
- CUBA.PASSIVE_RELATIONSHIP
inverse: COBRAMM.HAS_PART
HAS_PROPERTY:
subclass_of:
- CUBA.ACTIVE_RELATIONSHIP
inverse: COBRAMM.IS_PROPERTY_OF
default_rel: false
IS_PROPERTY_OF:
subclass_of:
- CUBA.PASSIVE_RELATIONSHIP
inverse: COBRAMM.HAS_PROPERTY
############## ENTITIES
WRAPPER:
subclass_of:
- CUBA.WRAPPER
- COBRAMM.HAS_PART:
range: COBRAMM.SYSTEM
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.ACCURACY
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.CASE
exclusive: false
cardinality: 1
CASE:
subclass_of:
- CUBA.ENTITY
attributes:
COBRAMM.CASE_NAME:
ACCURACY:
subclass_of:
- CUBA.ENTITY
attributes:
COBRAMM.ACCURACY_VALUE:
SYSTEM:
subclass_of:
- CUBA.ENTITY
- COBRAMM.HAS_PART:
range: COBRAMM.COBRAMM_STATE
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.MATERIAL
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.SOLVENT
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.TEMPERATURE
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.PRESSURE
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.SPECTRUM
exclusive: false
cardinality: some
- COBRAMM.HAS_PART:
range: COBRAMM.ENERGY
exclusive: false
cardinality: some
MATERIAL:
subclass_of:
- COBRAMM.SYSTEM
- COBRAMM.HAS_PART:
range: COBRAMM.ATOM
exclusive: false
cardinality: some
- COBRAMM.HAS_PART:
range: COBRAMM.POINT_CHARGE
exclusive: false
cardinality: some
- COBRAMM.HAS_PART:
range: COBRAMM.CHARGE
exclusive: false
cardinality: 1
SOLVENT:
subclass_of:
- COBRAMM.SYSTEM
- COBRAMM.HAS_PART:
range: COBRAMM.MOLECULE
exclusive: false
cardinality: 1
SPECTRUM:
subclass_of:
- COBRAMM.SYSTEM
- COBRAMM.HAS_PART:
range: COBRAMM.BIN
exclusive: false
cardinality: some
- COBRAMM.HAS_PART:
range: COBRAMM.TIME
exclusive: false
cardinality: 1
BIN:
subclass_of:
- COBRAMM.SPECTRUM
- COBRAMM.HAS_PART:
range: COBRAMM.INTENSITY
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.WAVELENGTH
exclusive: false
cardinality: 1
ATOM:
subclass_of:
- COBRAMM.MATERIAL
- COBRAMM.HAS_PART:
range: COBRAMM.POSITION
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.ELEMENT_ID
exclusive: false
cardinality: 1
POINT_CHARGE:
subclass_of:
- COBRAMM.MATERIAL
- COBRAMM.HAS_PART:
range: COBRAMM.POSITION
exclusive: false
cardinality: 1
- COBRAMM.HAS_PART:
range: COBRAMM.FLOAT_CHARGE
exclusive: false
cardinality: 1
COBRAMM_STATE:
subclass_of:
- COBRAMM.SYSTEM
attributes:
COBRAMM.PATH:
MOLECULE:
subclass_of:
- COBRAMM.SOLVENT
attributes:
COBRAMM.COMMERCIAL_NAME:
CHARGE:
subclass_of:
- COBRAMM.MATERIAL
attributes:
COBRAMM.INTEGER_VALUE:
FLOAT_CHARGE:
subclass_of:
- COBRAMM.MATERIAL
attributes:
COBRAMM.SCALAR_VALUE:
ELEMENT_ID:
subclass_of:
- COBRAMM.ATOM
attributes:
COBRAMM.ATOM_SYMBOL:
############## QUANTITIES
PHYSICAL_VECTOR_QUANTITY:
subclass_of:
- CUBA.ENTITY
attributes:
COBRAMM.VECTOR_VALUE:
COBRAMM.UNIT:
PHYSICAL_SCALAR_QUANTITY:
subclass_of:
- CUBA.ENTITY
attributes:
COBRAMM.SCALAR_VALUE:
COBRAMM.UNIT:
POSITION:
subclass_of:
- COBRAMM.PHYSICAL_VECTOR_QUANTITY
TIME:
subclass_of:
- COBRAMM.PHYSICAL_SCALAR_QUANTITY
TEMPERATURE:
subclass_of:
- COBRAMM.PHYSICAL_SCALAR_QUANTITY
PRESSURE:
subclass_of:
- COBRAMM.PHYSICAL_SCALAR_QUANTITY
INTENSITY:
subclass_of:
- COBRAMM.PHYSICAL_SCALAR_QUANTITY
WAVELENGTH:
subclass_of:
- COBRAMM.PHYSICAL_SCALAR_QUANTITY
ENERGY:
subclass_of:
- COBRAMM.PHYSICAL_SCALAR_QUANTITY
############## ATTRIBUTES
VECTOR_VALUE:
subclass_of:
- CUBA.ATTRIBUTE
datatype: VECTOR:3
SCALAR_VALUE:
subclass_of:
- CUBA.ATTRIBUTE
datatype: FLOAT
INTEGER_VALUE:
subclass_of:
- CUBA.ATTRIBUTE
datatype: INT
STRING_VALUE:
subclass_of:
- CUBA.ATTRIBUTE
datatype: STRING
PATH:
subclass_of:
- COBRAMM.STRING_VALUE
datatype: STRING
UNIT:
subclass_of:
- COBRAMM.STRING_VALUE
datatype: STRING
ATOM_SYMBOL:
subclass_of:
- COBRAMM.STRING_VALUE
datatype: STRING
COMMERCIAL_NAME:
subclass_of:
- COBRAMM.STRING_VALUE
datatype: STRING
ACCURACY_VALUE:
subclass_of:
- COBRAMM.INTEGER_VALUE
datatype: INT
CASE_NAME:
subclass_of:
- COBRAMM.STRING_VALUE
datatype: STRING