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Determining imprinted genes from scRNA-seq dataset #8

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singcell opened this issue Jan 30, 2024 · 0 comments
Open

Determining imprinted genes from scRNA-seq dataset #8

singcell opened this issue Jan 30, 2024 · 0 comments

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@singcell
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I am impressed by your tool and eager to leverage its capabilities in my research. Using a reciprocal cross design, I have generated stem cell lines from two distinct mouse strains with characterized SNPs. I have performed scRNA-seq on these cell lines from both reciprocal crosses. I am specifically interested in identifying imprinted genes within this dataset using your program. Can you please advise on the best approach to integrate my SNP and scRNA-seq data into your tool for this purpose?

Thank you!

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