From 7261eaf0c3f39badb2bb25fad776bbdb3bc428f7 Mon Sep 17 00:00:00 2001 From: David Laehnemann Date: Wed, 11 Sep 2024 15:35:59 +0200 Subject: [PATCH] docs: rename events, to put less emphasis on germline vs. somativ in normal samples Due to sampling issues, this distinction is usually not that clear, so we should keep the wording here a bit more cautious. --- config/scenario.yaml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/config/scenario.yaml b/config/scenario.yaml index f75649b7e..a818ea67c 100644 --- a/config/scenario.yaml +++ b/config/scenario.yaml @@ -29,6 +29,6 @@ events: somatic_tumor_low: "tumor:]0.0,0.1[ & normal:0.0" somatic_tumor_medium: "tumor:[0.1,0.3[ & normal:0.0" somatic_tumor_high: "tumor:[0.3,1.0] & normal:0.0" - somatic_normal: "normal:]0.0,0.5[ | normal:]0.5,1.0[" - germline_hom: "normal:1.0" - germline_het: "normal:0.5" + normal_het: "normal:0.5" + normal_hom: "normal:1.0" + normal_other: "normal:]0.0,0.5[ | normal:]0.5,1.0["