{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":825077591,"defaultBranch":"main","name":"RolshausenLab_Aspergillus_DatePalm","ownerLogin":"stajichlab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2024-07-06T17:49:36.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/2850967?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1720289403.0","currentOid":""},"activityList":{"items":[{"before":"4e216d99ba08ebee731f59f02a67faa56d500ea4","after":"b18f3c0d9bec8ca15fef3abe40b8cc4cdcfa14db","ref":"refs/heads/main","pushedAt":"2024-07-22T23:17:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"add popgen pieces","shortMessageHtmlLink":"add popgen pieces"}},{"before":"53a16ef2f515c6f22b1c4bd6a85976fd8d43d0bc","after":"4e216d99ba08ebee731f59f02a67faa56d500ea4","ref":"refs/heads/main","pushedAt":"2024-07-09T16:08:10.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"pipeline steps for variant discovery and analysis","shortMessageHtmlLink":"pipeline steps for variant discovery and analysis"}},{"before":"f711075211c1a4e880d014e5a71b9f80bc32b3d2","after":"53a16ef2f515c6f22b1c4bd6a85976fd8d43d0bc","ref":"refs/heads/main","pushedAt":"2024-07-09T06:43:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"try adding classification files","shortMessageHtmlLink":"try adding classification files"}},{"before":"0f592525114dc407262136a462bdf94203e9a2ea","after":"f711075211c1a4e880d014e5a71b9f80bc32b3d2","ref":"refs/heads/main","pushedAt":"2024-07-08T23:34:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"mosdepth","shortMessageHtmlLink":"mosdepth"}},{"before":"acca6d0c9046ca9bbf0f363cb8df8e864ca7bd31","after":"0f592525114dc407262136a462bdf94203e9a2ea","ref":"refs/heads/main","pushedAt":"2024-07-08T23:28:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"update for using mean not median to plot depth","shortMessageHtmlLink":"update for using mean not median to plot depth"}},{"before":"79b1261b06f6e6212c0e10f447c2aa86c5222da9","after":"acca6d0c9046ca9bbf0f363cb8df8e864ca7bd31","ref":"refs/heads/main","pushedAt":"2024-07-08T23:27:50.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"coverage plots","shortMessageHtmlLink":"coverage plots"}},{"before":"423ddeadda99b0421b3af94faa9a86478c9e1b45","after":"79b1261b06f6e6212c0e10f447c2aa86c5222da9","ref":"refs/heads/main","pushedAt":"2024-07-08T06:09:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"summary of coverage calculation","shortMessageHtmlLink":"summary of coverage calculation"}},{"before":"9bf4367b9af5d51cfbbb662469d142de0c14f0dd","after":"423ddeadda99b0421b3af94faa9a86478c9e1b45","ref":"refs/heads/main","pushedAt":"2024-07-08T06:06:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"stats for nanopore","shortMessageHtmlLink":"stats for nanopore"}},{"before":"c80fa8b83839137d205d58c6b96280d2b147d124","after":"9bf4367b9af5d51cfbbb662469d142de0c14f0dd","ref":"refs/heads/main","pushedAt":"2024-07-08T06:05:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"logs","shortMessageHtmlLink":"logs"}},{"before":"cdfb905e83a4a37652e49537590ca42a7a6b76a0","after":"c80fa8b83839137d205d58c6b96280d2b147d124","ref":"refs/heads/main","pushedAt":"2024-07-08T06:03:20.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"annotation run","shortMessageHtmlLink":"annotation run"}},{"before":"c391e4791e0d89129ce32ed18a7bf7c47a556292","after":"cdfb905e83a4a37652e49537590ca42a7a6b76a0","ref":"refs/heads/main","pushedAt":"2024-07-08T06:02:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"fix the RNAseq read names","shortMessageHtmlLink":"fix the RNAseq read names"}},{"before":"8b967cbb1213558d8085b32f8c185d75afdd5913","after":"c391e4791e0d89129ce32ed18a7bf7c47a556292","ref":"refs/heads/main","pushedAt":"2024-07-08T06:01:42.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"archive tbl creation","shortMessageHtmlLink":"archive tbl creation"}},{"before":"5490c0c687d951d710963596ff6524f7351dc777","after":"8b967cbb1213558d8085b32f8c185d75afdd5913","ref":"refs/heads/main","pushedAt":"2024-07-08T05:12:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"note","shortMessageHtmlLink":"note"}},{"before":"72d6479742a65db17bb563813a43d728ab8918d8","after":"5490c0c687d951d710963596ff6524f7351dc777","ref":"refs/heads/main","pushedAt":"2024-07-07T21:34:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"asm stats","shortMessageHtmlLink":"asm stats"}},{"before":"7b033ff80c09c18359ec246c0221131dbe943190","after":"72d6479742a65db17bb563813a43d728ab8918d8","ref":"refs/heads/main","pushedAt":"2024-07-07T21:33:35.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"set telomere repeat to be different","shortMessageHtmlLink":"set telomere repeat to be different"}},{"before":"5dc004fa8f18ab3f7f7a24c1f1898b16ef91968f","after":"7b033ff80c09c18359ec246c0221131dbe943190","ref":"refs/heads/main","pushedAt":"2024-07-07T21:25:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"add asm stats","shortMessageHtmlLink":"add asm stats"}},{"before":"9b7a4c86335ab5f8d297fbd8d2ae91c8d71e23dd","after":"5dc004fa8f18ab3f7f7a24c1f1898b16ef91968f","ref":"refs/heads/main","pushedAt":"2024-07-07T21:23:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"read mapping info","shortMessageHtmlLink":"read mapping info"}},{"before":"1e5fa8cb25d02e5aa3da4e1275237f37e8931712","after":"9b7a4c86335ab5f8d297fbd8d2ae91c8d71e23dd","ref":"refs/heads/main","pushedAt":"2024-07-07T21:22:28.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"genome size estimate","shortMessageHtmlLink":"genome size estimate"}},{"before":"9829a004a4971ea78a5fc1abd855df7b3eefb54d","after":"1e5fa8cb25d02e5aa3da4e1275237f37e8931712","ref":"refs/heads/main","pushedAt":"2024-07-07T21:18:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"telomere scan update","shortMessageHtmlLink":"telomere scan update"}},{"before":"424df745040d819da08ac7eca6f7fed7c96b9537","after":"9829a004a4971ea78a5fc1abd855df7b3eefb54d","ref":"refs/heads/main","pushedAt":"2024-07-07T21:18:01.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"udpate stats","shortMessageHtmlLink":"udpate stats"}},{"before":"7fd6f46089c846dbc91476217fe1d3d7d25edcb1","after":"424df745040d819da08ac7eca6f7fed7c96b9537","ref":"refs/heads/main","pushedAt":"2024-07-07T20:29:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"readme start","shortMessageHtmlLink":"readme start"}},{"before":"341986acb4f34ea81ef62f927195ca335d46c411","after":"7fd6f46089c846dbc91476217fe1d3d7d25edcb1","ref":"refs/heads/main","pushedAt":"2024-07-07T20:23:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"Create LICENSE","shortMessageHtmlLink":"Create LICENSE"}},{"before":"3b6f56efc19964c56108fec146ed6dc0753f32c9","after":"341986acb4f34ea81ef62f927195ca335d46c411","ref":"refs/heads/main","pushedAt":"2024-07-06T18:16:32.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"fix samplefile->samples variable","shortMessageHtmlLink":"fix samplefile->samples variable"}},{"before":null,"after":"3b6f56efc19964c56108fec146ed6dc0753f32c9","ref":"refs/heads/main","pushedAt":"2024-07-06T18:10:03.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hyphaltip","name":"Jason Stajich","path":"/hyphaltip","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/48827?s=80&v=4"},"commit":{"message":"seqcoast info","shortMessageHtmlLink":"seqcoast info"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0yMlQyMzoxNzoxMC4wMDAwMDBazwAAAASGRzmA","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0wNlQxODoxMDowMy4wMDAwMDBazwAAAAR4hzXR"}},"title":"Activity ยท stajichlab/RolshausenLab_Aspergillus_DatePalm"}