requirements.txt

anndata==0.10.3  
array-api-compat==1.4  
backoff==2.2.1  
certifi==2023.11.17  
chardet==5.2.0  
charset-normalizer==3.3.2  
colorbrewer==0.2.0  
colour==0.1.5  
contourpy==1.2.0  
cycler==0.12.1  
decorator==5.1.1  
exceptiongroup==1.2.0  
filelock==3.13.1  
fonttools==4.47.0  
fsspec==2023.12.2  
get-annotations==0.1.2  
h5py==3.10.0  
idna==3.6  
igraph==0.10.8  
importlib-resources==6.1.1  
Jinja2==3.1.2  
joblib==1.3.2  
kiwisolver==1.4.5  
llvmlite==0.41.1  
louvain==0.8.1  
MarkupSafe==2.1.3  
matplotlib==3.8.2  
mpmath==1.3.0  
natsort==8.4.0  
networkx==3.2.1  
numba==0.58.1  
numpy==1.26.2  
packaging==23.2  
pandas==2.0.3  
patsy==0.5.5  
Pillow==10.1.0  
py4cytoscape==1.9.0  
pynndescent==0.5.11  
pyparsing==3.1.1  
python-dateutil==2.8.2  
pytz==2023.3.post1  
requests==2.31.0  
scanpy==1.9.6  
scikit-learn==1.3.2  
scipy==1.11.4  
seaborn==0.12.2  
session-info==1.0.0  
six==1.16.0  
statsmodels==0.14.1  
stdlib-list==0.10.0  
sympy==1.12  
texttable==1.7.0  
threadpoolctl==3.2.0  
torch==2.1.2  
tqdm==4.66.1  
typing_extensions==4.9.0  
tzdata==2023.3  
umap-learn==0.5.5  
urllib3==2.1.0  
zipp==3.17.0  
pandas==2.0.3  
scanpy==1.9.6