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test-and-build-docs.yml
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name: Build test and documentation page
on:
push:
branches: [ master ]
pull_request:
branches: [ master ]
jobs:
test:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
ref: ${{ github.event.pull_request.head.ref }}
repository: ${{ github.event.pull_request.head.repo.full_name }}
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: 3.11
- name: Check Python and pip version
run: |
python --version
pip --version
- name: Install dependencies
run: |
pip install -U pip
pip install .[tests]
- name: Run tests
run: pytest --cov=pubmed_parser tests/ --verbose
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v4
docs:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
ref: ${{ github.event.pull_request.head.ref || github.ref }}
repository: ${{ github.event.pull_request.head.repo.full_name || github.repository }}
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: 3.11
- name: Install dependencies
run: |
pip install -U pip
pip install -e .[docs]
- name: Verify pubmed_parser installation
run: |
python -c "import pubmed_parser; print(f'pubmed_parser version: {pubmed_parser.__version__}')"
- name: Build documentation
run: |
cd docs
make html
touch _build/html/.nojekyll
- name: Deploy to GitHub Pages
uses: peaceiris/actions-gh-pages@v4
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_dir: docs/_build/html/
keep_files: true