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methylation-arrays

Here are 5 public repositories matching this topic...

metamaden / methyPre

Methylation array preprocessing.

bioconductor preprocessing combat normalization qc hg19 sva cpg hm450k illumina-bead-chip methylation-arrays minfi batch-correction swan-normalize illumina-normalize

Updated Sep 6, 2018
R

markgene / maxprobes

Methylation Array Cross-Reactive Probes

methylation methylation-microarrays methylation-arrays

Updated Oct 19, 2018
R

stjude-biohackathon / MethylMiner

A methylation array analysis pipeline tailored for discovering rare methylation events with interactive data visualization

bioinformatics-pipeline methylation-arrays methylation-analysis

Updated Apr 30, 2024
Python

IlluminaMouseMethylationanno.12.v1.mm10

chiaraherzog / IlluminaMouseMethylationanno.12.v1.mm10

This package provides Illumina Mouse Methylation Array Annotation (12.v1, Genome Build mm10) compatible with minfi.

bioinformatics illumina-bead-chip methylation-arrays minfi methylation-analysis methylation-annotation

Updated Jul 11, 2024
R

metamaden / InfiniumPurifyR

Estimate tumor enrichment from methylation array data.

preprocessing qc hm450k illumina-bead-chip methylation-arrays tumor-purity

Updated Dec 1, 2017
R

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