Write reproducible code for getting and processing ChEMBL
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Updated
Jan 30, 2024 - Jupyter Notebook
Write reproducible code for getting and processing ChEMBL
Health Assessment Workspace Collaborative, a content management system for systematic reviews
The eNanoMapper ontology
Bayesian No-Effect-Concentration estimation in R
R package for simulation of caffeine concentration <doi:10.12793/tcp.2017.25.3.141>. https://asancpt.github.io/caffsim
Data-driven chemical-induced toxicity prediction by machine learning using chemical and bioactivity data
toxpiR R package for the Toxicological Priority Index (ToxPi) algorithm.
R Shiny App to Visualize and Summarize Repeat-Dose Toxicology Study Results
The rebirth of IMPACT World+ in a fully automated and transparent fashion.
A query engine to retrive information from AOP wiki graph database.
Repository to coordinate the work of the Toxicology Community.
SARAlerts is a code to generate structural alerts (toxic alerts) using Local Interpretable Model-Agnostic Explanations (LIME) of machine learning models from Tox21, Clintox, and Sider datasets.
OpenRiskNet pipeline for TGX case study: toxicology predictions based on transcriptomic profiles
links related to SEND/Nonclinical toxicology
BBBP Explainer is a code to generate structural alerts of blood-brain barrier penetrating and non-penetrating drugs using Local Interpretable Model-Agnostic Explanations (LIME) of machine learning models from BBBP dataset.
ANDA: An open-source tool for automated image analysis of in vitro neuronal cells
My personal website, served at https://cthoyt.com
OpenTox functionality for Bioclipse.
Analysis of Ecotoxicology
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