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For reasons specific to issues I've encountered with the recombination and gene conversion parameters that I'm working with, I would like to use tskit tools to do the following:
Suppose that I've generated a tree sequence object where initializeGenomicEelment() is given a length of 15kb. Given the output tree, I would like to create a new tree sequence object using only the middle 5 kb but retaining the tree structure.
Is there a simple tskit function that will let me take a ts object and specify a subset/range of sites to consider?
Thank you for any suggestions.
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