-
Notifications
You must be signed in to change notification settings - Fork 16
/
main_geo.py
572 lines (532 loc) · 27.7 KB
/
main_geo.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
import sqlite3
import sqlparse
import random
import numpy as np
import torch
import os
import argparse
import json
import time
import pandas as pd
from bridge_content_encoder import get_database_matches
from transformers import AutoTokenizer
from tqdm import tqdm
from torch import nn
from sentence_transformers import SentenceTransformer
from sklearn.metrics.pairwise import cosine_similarity
from collections import defaultdict
from utils import codex_execution
parser = argparse.ArgumentParser()
parser.add_argument('--model_key', type=str)
parser.add_argument('--selective_annotation_method', type=str)
parser.add_argument('--prompt_retrieval_method', default='similar',type=str)
parser.add_argument('--spider_database_dir', type=str)
parser.add_argument('--output_dir', required=True,type=str)
parser.add_argument('--annotation_size', default=100,type=int)
parser.add_argument('--seed', type=int)
parser.add_argument('--batch_size', default=10,type=int)
parser.add_argument('--embedding_model', default='sentence-transformers/all-mpnet-base-v2',type=str)
parser.add_argument('--debug', action='store_true')
args = parser.parse_args()
tokenizer_for_length = AutoTokenizer.from_pretrained('gpt2')
if not os.path.isdir(args.output_dir):
os.makedirs(args.output_dir,exist_ok=True)
model_keys = args.model_key.split('##')
def set_seed(seed: int):
random.seed(seed)
np.random.seed(seed)
torch.manual_seed(seed)
torch.cuda.manual_seed_all(seed)
def calculate_sentence_transformer_embedding(examples,embedding_model,mean_normal=False):
text_to_encode = [raw_item["seq_in"] for raw_item in examples]
num = len(text_to_encode)
emb_model = SentenceTransformer(embedding_model)
embeddings = []
bar = tqdm(range(0,num,20),desc='calculate embeddings')
for i in range(0,num,20):
embeddings += emb_model.encode(text_to_encode[i:i+20]).tolist()
bar.update(1)
embeddings = torch.tensor(embeddings)
if mean_normal:
mean_embeddings = torch.mean(embeddings, 0, True)
embeddings = embeddings - mean_embeddings
return embeddings
def maybe_add_quotes(val):
if isinstance(val, str):
return "'" + val + "'"
return str(val)
def get_db_schemas():
with sqlite3.connect(f'data/geoquery.sqlite') as conn:
cursor = conn.cursor()
cursor.execute("SELECT name FROM sqlite_master WHERE type='table';")
tables = cursor.fetchall()
schemas = {}
for table in tables:
cursor.execute("SELECT sql FROM sqlite_master WHERE type='table' AND name='{}';".format(table[0]))
schemas[table[0]] = cursor.fetchone()[0]
return schemas
def get_db_rows(*, rows=5, db_content_matching=True, question=None):
db_path = f'data/geoquery.sqlite'
results = {}
with sqlite3.connect(db_path) as conn:
cursor = conn.cursor()
cursor.execute("SELECT name FROM sqlite_master WHERE type='table';")
tables = cursor.fetchall()
for table in tables:
cursor.execute("PRAGMA table_info({})".format(table[0]))
results[table[0]] = pd.read_sql_query(f"SELECT * FROM {table[0]} LIMIT {rows}", conn)
if db_content_matching:
for table in results.keys():
where_clauses = list()
for col in results[table].keys():
matches = get_database_matches(question, table, col, db_path)
for match in matches:
where_clause = f'{col} = {maybe_add_quotes(match)}'
where_clauses.append(where_clause)
if len(where_clauses) > 0:
table_matches = pd.read_sql_query(
f"SELECT DISTINCT * FROM {table} WHERE {' OR '.join(where_clauses)} LIMIT {rows}", conn)
results[table] = table_matches
for k, v in results.items():
results[k] = v.to_string(index=False)
return results
def get_db_prompt(*, schema=True, rows=0, db_content_matching=True,question=None, reindent_aligned=True):
schemas = get_db_schemas()
examples = get_db_rows(rows=rows, db_content_matching=db_content_matching, question=question)
prompt = ''
if schema or (rows > 0):
for table in schemas.keys():
if schema:
prompt += sqlparse.format(schemas[table], reindent_aligned=reindent_aligned)
prompt += '\n'
if rows > 0:
prompt += '/*\n'
# prompt += f'{rows} example rows from table {table}:\n'
# prompt += f'SELECT * FROM {table} LIMIT {rows};\n'
if not schema:
prompt += f'Table: {table}\n'
prompt += examples[table]
prompt += '\n*/\n'
prompt += '\n'
return prompt
def get_prompt_instructions():
return "-- Using valid SQLite, answer the following questions for the tables provided above.\n"
def construct_prompt(db_prompt, instructions, question):
return f"{db_prompt}{instructions}\n-- {question}\nSELECT"
def get_instance_length(idx,local_examples):
return len(tokenizer_for_length(f"-- {local_examples[idx]['question']}\n{local_examples[idx]['query']}\n\n")['input_ids'])
def select_2(train_embs,test_embs,downstream_train_examples,downstream_test_examples,phase2_selection):
cos = nn.CosineSimilarity(dim=1, eps=1e-6)
bar = tqdm(range(len(downstream_test_examples)),desc="phase 2 similar select")
if not os.path.isdir(os.path.join(args.output_dir,'prompts')):
os.makedirs(os.path.join(args.output_dir,'prompts'),exist_ok=True)
instruction = get_prompt_instructions()
prompt_dir = os.path.join(args.output_dir,'prompts')
for test_id,one_test_instance in enumerate(downstream_test_examples):
cur_prompt = get_db_prompt(rows=3,question=one_test_instance['question'])+instruction
prompt_str = cur_prompt
prev_prompt_string_len = len(tokenizer_for_length(cur_prompt)['input_ids'])
if phase2_selection in ['similar']:
# print('similar selection')
test_e_reshape = test_embs[test_id].reshape(1, -1)
scores = cos(test_e_reshape, train_embs).numpy()
sorted_indices = np.argsort(scores)
elif phase2_selection in ['random']:
sorted_indices = np.random.permutation(range(len(downstream_train_examples)))
selected_indices = []
# sorted_indices = sorted_indices[-16:]
num_indices = len(sorted_indices)
for idx in range(num_indices-1,-1,-1):
prev_prompt_string_len += get_instance_length(sorted_indices[idx],downstream_train_examples)
cur_prompt_string_len = prev_prompt_string_len + \
len(tokenizer_for_length(f"-- {downstream_test_examples[test_id]['question']}\nSELECT")['input_ids'])
if cur_prompt_string_len>3800:
break
selected_indices.append(idx)
one_test_emb = test_embs[test_id]
indices_scores = []
for idx in selected_indices:
indices_scores.append([idx, cos(train_embs[sorted_indices[idx]].reshape(1, -1), one_test_emb.reshape(1, -1)).item()])
indices_scores = sorted(indices_scores, key=lambda x: x[1], reverse=True)
new_selected_indices = [x[0] for x in indices_scores]
if phase2_selection in ['similar']:
assert new_selected_indices == selected_indices, f"new_selected_indices={new_selected_indices}, " \
f"selected_indices={selected_indices}"
selected_indices = new_selected_indices
select_num = len(selected_indices)
second_phase_selected_indices = []
for idx in range(select_num-1,-1,-1):
prompt_str += f"-- {downstream_train_examples[sorted_indices[selected_indices[idx]]]['question']}\n" \
f"{downstream_train_examples[sorted_indices[selected_indices[idx]]]['query']}\n\n"
second_phase_selected_indices.append([sorted_indices[selected_indices[idx]].item(),
downstream_train_examples[sorted_indices[selected_indices[idx]]]['id']
])
assert one_test_instance['question']==downstream_test_examples[test_id]['question'],\
f"one_test_instance['question']={one_test_instance['question']}, " \
f"downstream_test_examples[test_id]['question']={downstream_test_examples[test_id]['question']}"
prompt_str += f"-- {one_test_instance['question']}\nSELECT"
with open(os.path.join(prompt_dir,f"{downstream_test_examples[test_id]['id']}.json"),'w') as f:
json.dump([[test_id,second_phase_selected_indices,],
prompt_str,downstream_test_examples[test_id]
],f,indent=4)
bar.update(1)
def find_indices_from_embeddings(embeddings,select_num,mean_normal=False):
if mean_normal:
embeddings = torch.tensor(embeddings, dtype=torch.float)
embeddings_mean = torch.mean(embeddings, 0, True)
embeddings = embeddings - embeddings_mean
selected_indices = []
first_id = random.choice(range(len(embeddings)))
selected_indices.append(first_id)
selected_representations = embeddings[first_id].reshape(1, -1)
for count in range(select_num - 1):
scores = np.sum(cosine_similarity(embeddings, selected_representations), axis=1)
for i in selected_indices:
scores[i] = float('inf')
min_idx = np.argmin(scores)
selected_representations = torch.cat((selected_representations,
embeddings[min_idx].reshape(1, -1)), 0)
selected_indices.append(min_idx.item())
return selected_indices
def vote_k_select(embeddings,select_num,k,overlap_threshold,vote_file=None):
n = len(embeddings)
if vote_file is not None and os.path.isfile(vote_file):
with open(vote_file) as f:
vote_stat = json.load(f)
else:
bar = tqdm(range(n),desc=f'vote {k} selection')
vote_stat = defaultdict(list)
for i in range(n):
cur_emb = embeddings[i].reshape(1, -1)
cur_scores = np.sum(cosine_similarity(embeddings, cur_emb), axis=1)
sorted_indices = np.argsort(cur_scores).tolist()[-k-1:-1]
for idx in sorted_indices:
if idx!=i:
vote_stat[idx].append(i)
bar.update(1)
if vote_file is not None:
with open(vote_file,'w') as f:
json.dump(vote_stat,f)
votes = sorted(vote_stat.items(),key=lambda x:len(x[1]),reverse=True)
j = 0
selected_indices = []
while len(selected_indices)<select_num and j<len(votes):
candidate_set = set(votes[j][1])
flag = True
for pre in range(j):
cur_set = set(votes[pre][1])
if len(candidate_set.intersection(cur_set))>=overlap_threshold*len(candidate_set):
flag = False
break
if not flag:
j += 1
continue
selected_indices.append(int(votes[j][0]))
j += 1
if len(selected_indices)<select_num:
unselected_indices = []
cur_num = len(selected_indices)
for i in range(n):
if not i in selected_indices:
unselected_indices.append(i)
selected_indices += random.sample(unselected_indices,select_num-cur_num)
return selected_indices
def v2_vote_k_select(embeddings,select_num,k,vote_file=None):
n = len(embeddings)
if vote_file is not None and os.path.isfile(vote_file):
with open(vote_file) as f:
vote_stat = json.load(f)
else:
bar = tqdm(range(n),desc=f'v2 vote {k} selection')
vote_stat = defaultdict(list)
for i in range(n):
cur_emb = embeddings[i].reshape(1, -1)
cur_scores = np.sum(cosine_similarity(embeddings, cur_emb), axis=1)
sorted_indices = np.argsort(cur_scores).tolist()[-k-1:-1]
for idx in sorted_indices:
if idx!=i:
vote_stat[idx].append(i)
bar.update(1)
if vote_file is not None:
with open(vote_file,'w') as f:
json.dump(vote_stat,f)
votes = sorted(vote_stat.items(),key=lambda x:len(x[1]),reverse=True)
selected_indices = []
selected_times = defaultdict(int)
while len(selected_indices)<select_num:
cur_scores = defaultdict(int)
for idx,candidates in votes:
if idx in selected_indices:
cur_scores[idx] = -100
continue
for one_support in candidates:
if not one_support in selected_indices:
cur_scores[idx] += 10 ** (-selected_times[one_support])
cur_selected_idx = max(cur_scores.items(),key=lambda x:x[1])[0]
selected_indices.append(int(cur_selected_idx))
for idx_support in vote_stat[cur_selected_idx]:
selected_times[idx_support] += 1
return selected_indices
def select_iterative(train_embs,test_embs,downstream_train_examples,downstream_test_examples,phase2_selection,identifier=''):
cos = nn.CosineSimilarity(dim=1, eps=1e-6)
bar = tqdm(range(len(downstream_test_examples)), desc="prepare prompts for probability selection")
cur_prompt_dir = os.path.join(args.output_dir,f'prompts_iterative_{identifier}')
if not os.path.isdir(cur_prompt_dir):
os.makedirs(cur_prompt_dir, exist_ok=True)
instruction = get_prompt_instructions()
for test_id, one_test_instance in enumerate(downstream_test_examples):
cur_prompt = get_db_prompt(rows=3, question=one_test_instance['question']) + instruction
prompt_str = cur_prompt
prev_prompt_string_len = len(tokenizer_for_length(cur_prompt)['input_ids'])
test_e_reshape = test_embs[test_id].reshape(1, -1)
scores = cos(test_e_reshape, train_embs).numpy()
sorted_indices = np.argsort(scores).tolist()
while scores[sorted_indices[-1]]==1:
sorted_indices.pop()
if len(sorted_indices)==0:
print('sorted indices: ',scores,len(sorted_indices))
if sorted_indices[-1]>=len(scores):
print(sorted_indices[-1],len(scores))
sorted_indices = np.array(sorted_indices)
selected_indices = []
num_indices = len(sorted_indices)
for idx in range(num_indices - 1, -1, -1):
prev_prompt_string_len += get_instance_length(sorted_indices[idx], downstream_train_examples)
cur_prompt_string_len = prev_prompt_string_len + \
len(tokenizer_for_length(
f"-- {downstream_test_examples[test_id]['question']}\nSELECT")['input_ids'])
if cur_prompt_string_len > 3800:
break
selected_indices.append(idx)
one_test_emb = test_embs[test_id]
indices_scores = []
for idx in selected_indices:
indices_scores.append(
[idx, cos(train_embs[sorted_indices[idx]].reshape(1, -1), one_test_emb.reshape(1, -1)).item()])
indices_scores = sorted(indices_scores, key=lambda x: x[1], reverse=True)
new_selected_indices = [x[0] for x in indices_scores]
if phase2_selection in ['similar']:
assert new_selected_indices == selected_indices, f"new_selected_indices={new_selected_indices}, " \
f"selected_indices={selected_indices}"
selected_indices = new_selected_indices
selected_indices = new_selected_indices
select_num = len(selected_indices)
second_phase_selected_indices = []
for idx in range(select_num - 1, -1, -1):
prompt_str += f"-- {downstream_train_examples[sorted_indices[selected_indices[idx]]]['question']}\n" \
f"{downstream_train_examples[sorted_indices[selected_indices[idx]]]['query']}\n\n"
second_phase_selected_indices.append([sorted_indices[selected_indices[idx]].item(),
downstream_train_examples[sorted_indices[selected_indices[idx]]]['id']
])
assert one_test_instance['question'] == downstream_test_examples[test_id]['question'], \
f"one_test_instance['question']={one_test_instance['question']}, " \
f"downstream_test_examples[test_id]['question']={downstream_test_examples[test_id]['question']}"
prompt_str += f"-- {one_test_instance['question']}\nSELECT"
with open(os.path.join(cur_prompt_dir,f"{downstream_test_examples[test_id]['id']}.json"), 'w') as f:
json.dump([[test_id, second_phase_selected_indices, ],
prompt_str,downstream_test_examples[test_id]
], f, indent=4)
bar.update(1)
def v2_vote_k_prob(train_embs,downstream_train_examples,
phase2_selection,):
knn = 150
selected_indices = v2_vote_k_select(embeddings=train_embs,
select_num=args.batch_size,
k=knn,
vote_file=os.path.join(args.output_dir,f"v2_vote_{args.selective_annotation_method}.json"))
cur_annotated_examples = [downstream_train_examples[idx] for idx in selected_indices]
select_iterative(train_embs[selected_indices], train_embs, cur_annotated_examples, downstream_train_examples,
phase2_selection, identifier='0')
prompt_cache_dir = os.path.join(args.output_dir, f"prompts_iterative_0")
candidate_prompt_files = os.listdir(prompt_cache_dir)
prompt_files = [f for f in candidate_prompt_files if f.endswith('.json')]
assert len(prompt_files) == len(downstream_train_examples), f"len(prompt_files)={len(prompt_files)}," \
f"len(downstream_train_examples)={len(downstream_train_examples)}"
output_dir = os.path.join(args.output_dir,'results_iterative_0')
if not os.path.isdir(output_dir):
os.makedirs(output_dir, exist_ok=True)
count = 0
execution_count = 0
f = True
while f:
f = False
count += 1
bar = tqdm(range(len(prompt_files)), desc=f" LLM inference")
for file in prompt_files:
bar.update(1)
if not os.path.isfile(os.path.join(output_dir,file)):
f = True
cur_key = model_keys[execution_count % len(model_keys)]
execution_count += 1
try:
codex_execution(key=cur_key, output_path=os.path.join(output_dir, file),
prompt_path=os.path.join(prompt_cache_dir, file))
except Exception as e:
print(e)
time.sleep(3)
idx_scores = {}
n = len(downstream_train_examples)
for idx in range(n):
if idx in selected_indices:
idx_scores[idx] = float('inf')
continue
with open(f"{output_dir}/{idx}.json") as f:
cur_result = json.load(f)
idx_scores[idx] = sum(cur_result['choices'][0]["logprobs"]["token_logprobs"]) / len(
cur_result['choices'][0]["logprobs"]["token_logprobs"])
sorted_scores = sorted(idx_scores.items(), key=lambda x: x[1])
with open(os.path.join(args.output_dir,f'v2_vote_{args.selective_annotation_method}.json')) as f:
vote_stat = json.load(f)
votes = sorted(vote_stat.items(), key=lambda x: len(x[1]), reverse=True)
selected_times = defaultdict(int)
select_num_1 = args.annotation_size-len(selected_indices)
inter = int(len(downstream_train_examples)*0.9/select_num_1)
for prev_idx in selected_indices:
for idx_support in vote_stat[str(prev_idx)]:
selected_times[idx_support] += 1
count_t = 0
while len(selected_indices)<args.annotation_size and count_t*inter<len(votes):
cur_scores = defaultdict(int)
for idx, _ in sorted_scores[count_t*inter:(count_t+1)*inter]:
if not str(idx) in vote_stat:
cur_scores[idx] = 0
continue
candidates = vote_stat[str(idx)]
if idx in selected_indices:
cur_scores[idx] = -100
continue
for one_support in candidates:
if not one_support in selected_indices:
cur_scores[idx] += 10 ** (-selected_times[one_support])
cur_selected_idx = max(cur_scores.items(), key=lambda x: x[1])[0]
selected_indices.append(int(cur_selected_idx))
if cur_selected_idx in vote_stat:
for idx_support in vote_stat[cur_selected_idx]:
selected_times[idx_support] += 1
count_t += 1
if len(selected_indices)<args.annotation_size:
unselected_indices = []
for unselected_i in range(len(downstream_train_examples)):
if not unselected_i in selected_indices:
unselected_indices.append(unselected_i)
selected_indices += random.sample(unselected_indices,args.annotation_size-len(selected_indices))
return selected_indices
def process_examples():
with open('data/geoquery_train.json') as f:
prepared_train_examples = json.load(f)
with open('data/geoquery_eval.json') as f:
prepared_val_examples = json.load(f)
return prepared_train_examples,prepared_val_examples
set_seed(args.seed)
total_train_examples,total_eval_examples = process_examples()
if args.debug:
total_train_examples = total_train_examples[:50]
args.annotation_size = 10
args.batch_size = 3
if not args.debug:
eval_phase_selected_indices = random.sample(range(len(total_eval_examples)), 256)
else:
eval_phase_selected_indices = random.sample(range(len(total_eval_examples)), 5)
eval_examples = [total_eval_examples[idx] for idx in eval_phase_selected_indices]
processed_eval_examples = eval_examples
total_train_embeds = calculate_sentence_transformer_embedding(total_train_examples,args.embedding_model,mean_normal=True)
os.makedirs(args.output_dir,exist_ok=True)
total_train_examples_num = len(total_train_examples)
if args.selective_annotation_method in ['random']:
first_phase_selected_indices = random.sample(range(total_train_examples_num), args.annotation_size)
elif args.selective_annotation_method in ['diversity']:
first_phase_selected_indices = find_indices_from_embeddings(total_train_embeds,args.annotation_size)
elif args.selective_annotation_method in ['mfl']:
embeds = total_train_embeds
N, D = embeds.shape
norm_embeds = embeds / embeds.norm(dim=1, keepdim=True)
cosine = torch.einsum('nd,md->nm', norm_embeds, norm_embeds)
selected = torch.zeros(N, dtype=torch.bool)
max_similarity = torch.zeros(N) - 1
for k in tqdm(range(args.annotation_size)):
marginal_gain = torch.relu(cosine - max_similarity).sum(dim=1) * (1 - selected.float())
node = torch.argmax(marginal_gain)
selected[node] = True
max_similarity = torch.max(max_similarity, cosine[node])
first_phase_selected_indices = torch.nonzero(selected).squeeze().tolist()
elif args.selective_annotation_method in ['fast_votek']:
if os.path.isfile(os.path.join(args.output_dir,'first_phase_selected_indices.json')):
with open(os.path.join(args.output_dir,'first_phase_selected_indices.json')) as f:
first_phase_selected_indices = json.load(f)
else:
knn = 150
first_phase_selected_indices = v2_vote_k_select(embeddings=total_train_embeds,
select_num=args.annotation_size,
k=knn,
vote_file=os.path.join(args.output_dir,f"vote_{args.selective_annotation_method}.json"))
elif args.selective_annotation_method in ['votek']:
if os.path.isfile(os.path.join(args.output_dir,'first_phase_selected_indices.json')):
with open(os.path.join(args.output_dir,'first_phase_selected_indices.json')) as f:
first_phase_selected_indices = json.load(f)
else:
first_phase_selected_indices = v2_vote_k_prob(train_embs=total_train_embeds,
downstream_train_examples=total_train_examples,
phase2_selection=args.prompt_retrieval_method)
elif args.selective_annotation_method in ['full']:
first_phase_selected_indices = range(len(total_train_examples))
first_phase_selected_indices_to_cache = []
processed_train_examples = []
first_phase_selected_indices = sorted(first_phase_selected_indices)
for selected_idx in first_phase_selected_indices:
processed_train_examples.append(total_train_examples[selected_idx])
first_phase_selected_indices_to_cache.append([selected_idx, total_train_examples[selected_idx]['id']])
with open(os.path.join(args.output_dir,'example_pool.json'),'w') as f:
json.dump(processed_train_examples,f,indent=4)
with open(os.path.join(args.output_dir,'example_pool.json'),'w') as f:
json.dump(first_phase_selected_indices_to_cache,f,indent=4)
with open(os.path.join(args.output_dir,'eval_phase_selected_indices.json'),'w') as f:
json.dump(eval_phase_selected_indices,f,indent=4)
if args.prompt_retrieval_method in ['similar']:
select_2(total_train_embeds[first_phase_selected_indices],
calculate_sentence_transformer_embedding(processed_eval_examples,args.embedding_model),
processed_train_examples,processed_eval_examples,phase2_selection='similar')
elif args.prompt_retrieval_method in ['random']:
select_2(total_train_embeds[first_phase_selected_indices],
calculate_sentence_transformer_embedding(processed_eval_examples,args.embedding_model),
processed_train_examples,processed_eval_examples,phase2_selection='random')
candidate_prompt_files = os.listdir(os.path.join(args.output_dir,'prompts'))
prompt_files = [f for f in candidate_prompt_files if f.endswith('.json')]
prompt_cache_dir = os.path.join(args.output_dir,'prompts')
assert len(prompt_files) == len(processed_eval_examples), f"len(prompt_files)={len(prompt_files)}," \
f"len(processed_dev_examples)={len(processed_eval_examples)}"
output_dir = os.path.join(args.output_dir,'results')
if not os.path.isdir(output_dir):
os.makedirs(output_dir, exist_ok=True)
count = 0
f = True
execution_count = 0
while f:
f = False
count += 1
bar = tqdm(range(len(prompt_files)), desc=f" LLM inference")
for file in prompt_files:
bar.update(1)
if not os.path.isfile(os.path.join(output_dir, file)):
f = True
cur_key = model_keys[execution_count % len(model_keys)]
execution_count += 1
try:
codex_execution(key=cur_key, output_path=os.path.join(output_dir, file),
prompt_path=os.path.join(prompt_cache_dir, file))
except Exception as e:
print(e)
time.sleep(3)
preds = []
for i in eval_phase_selected_indices:
with open(os.path.join(output_dir,f'{i}.json')) as f:
r = json.load(f)
preds.append(r['choices'][0]['text'].replace('\n', ' '))
with open(os.path.join(output_dir,'preds_geogrpahy.txt'), 'w') as f:
for p in preds:
f.write("SELECT"+p + '\n')
os.system(f"python3 test_suite_sql_eval/evaluate_classical.py "
f"--gold=test_suite_database_gold_sql/gold_pkls/geography_gold.pickle "
f"--pred={os.path.join(output_dir,'preds_geogrpahy.txt')} --subset=geography --out_file={os.path.join(args.output_dir,'eval_out.json')} "
f"--test_suite_database_dir test_suite_database_gold_sql/test_suite_database "
f"--eval_num -1 --disable_cache --selected_evaluation_file {os.path.join(args.output_dir,'eval_phase_selected_indices.json')} "
f"--original_database_dir {args.spider_database_dir}")